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2yyz

From Proteopedia

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[[Image:2yyz.jpg|left|200px]]<br /><applet load="2yyz" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="2yyz, resolution 2.11&Aring;" />
 
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'''Crystal structure of Sugar ABC transporter, ATP-binding protein'''<br />
 
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==About this Structure==
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==Crystal structure of Sugar ABC transporter, ATP-binding protein==
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2YYZ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima] with <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=PEG:'>PEG</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YYZ OCA].
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<StructureSection load='2yyz' size='340' side='right'caption='[[2yyz]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
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[[Category: Single protein]]
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== Structural highlights ==
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[[Category: Thermotoga maritima]]
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<table><tr><td colspan='2'>[[2yyz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YYZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YYZ FirstGlance]. <br>
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[[Category: Bessho, Y.]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
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[[Category: Ethayathullah, A S.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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[[Category: Kaur, P.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yyz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yyz OCA], [https://pdbe.org/2yyz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yyz RCSB], [https://www.ebi.ac.uk/pdbsum/2yyz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yyz ProSAT], [https://www.topsan.org/Proteins/RSGI/2yyz TOPSAN]</span></td></tr>
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[[Category: Padmanabhan, B.]]
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</table>
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[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
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== Function ==
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[[Category: Singh, T P.]]
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[https://www.uniprot.org/uniprot/Q9WYQ2_THEMA Q9WYQ2_THEMA]
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[[Category: Yokoyama, S.]]
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== Evolutionary Conservation ==
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[[Category: PEG]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: SO4]]
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Check<jmol>
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[[Category: alpha and beta proteins (a/b) class]]
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<jmolCheckbox>
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[[Category: atp binding]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/2yyz_consurf.spt"</scriptWhenChecked>
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[[Category: national project on protein structural and functional analyses]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: nppsfa]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: riken structural genomics/proteomics initiative]]
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</jmolCheckbox>
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[[Category: rsgi]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yyz ConSurf].
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[[Category: structural genomics]]
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<div style="clear:both"></div>
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[[Category: sugar transport]]
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[[Category: tm0421]]
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[[Category: transport protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:58:48 2008''
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==See Also==
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*[[ABC transporter 3D structures|ABC transporter 3D structures]]
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Thermotoga maritima MSB8]]
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[[Category: Bessho Y]]
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[[Category: Ethayathullah AS]]
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[[Category: Kaur P]]
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[[Category: Padmanabhan B]]
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[[Category: Singh TP]]
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[[Category: Yokoyama S]]

Current revision

Crystal structure of Sugar ABC transporter, ATP-binding protein

PDB ID 2yyz

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