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2z53

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==Crystal structure of the S211A mutant of the ribosome inactivating protein PDL4 from P. dioica leaves==
==Crystal structure of the S211A mutant of the ribosome inactivating protein PDL4 from P. dioica leaves==
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<StructureSection load='2z53' size='340' side='right' caption='[[2z53]], [[Resolution|resolution]] 1.29&Aring;' scene=''>
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<StructureSection load='2z53' size='340' side='right'caption='[[2z53]], [[Resolution|resolution]] 1.29&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2z53]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bella_sombra_tree Bella sombra tree]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z53 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Z53 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2z53]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phytolacca_dioica Phytolacca dioica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z53 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z53 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.29&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2z4u|2z4u]], [[2qes|2qes]], [[2qet|2qet]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/rRNA_N-glycosylase rRNA N-glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.22 3.2.2.22] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z53 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z53 OCA], [https://pdbe.org/2z53 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z53 RCSB], [https://www.ebi.ac.uk/pdbsum/2z53 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z53 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2z53 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z53 OCA], [http://pdbe.org/2z53 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2z53 RCSB], [http://www.ebi.ac.uk/pdbsum/2z53 PDBsum]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/RIPL2_PHYDI RIPL2_PHYDI]] Inhibits protein synthesis. Does not cleave supercoiled pBR322 dsDNA.<ref>PMID:10213004</ref> <ref>PMID:15899692</ref>
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[https://www.uniprot.org/uniprot/RIPL2_PHYDI RIPL2_PHYDI] Inhibits protein synthesis. Does not cleave supercoiled pBR322 dsDNA.<ref>PMID:10213004</ref> <ref>PMID:15899692</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z5/2z53_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z5/2z53_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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</div>
</div>
<div class="pdbe-citations 2z53" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 2z53" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Ribosome inactivating protein 3D structures|Ribosome inactivating protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bella sombra tree]]
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[[Category: Large Structures]]
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[[Category: RRNA N-glycosylase]]
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[[Category: Phytolacca dioica]]
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[[Category: Berisio, R]]
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[[Category: Berisio R]]
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[[Category: Ruggiero, A]]
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[[Category: Ruggiero A]]
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[[Category: Crystal]]
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[[Category: Hydrolase]]
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[[Category: Ribosome inactivating protein]]
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Current revision

Crystal structure of the S211A mutant of the ribosome inactivating protein PDL4 from P. dioica leaves

PDB ID 2z53

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