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3a1i

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==Crystal structure of Rhodococcus sp. N-771 Amidase complexed with Benzamide==
==Crystal structure of Rhodococcus sp. N-771 Amidase complexed with Benzamide==
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<StructureSection load='3a1i' size='340' side='right' caption='[[3a1i]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
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<StructureSection load='3a1i' size='340' side='right'caption='[[3a1i]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3a1i]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_sp._n-771 Rhodococcus sp. n-771]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A1I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3A1I FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3a1i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_sp._N-771 Rhodococcus sp. N-771]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A1I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A1I FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNU:BENZAMIDE'>UNU</scene><br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.32&#8491;</td></tr>
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<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ami ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=88735 Rhodococcus sp. N-771])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNU:BENZAMIDE'>UNU</scene></td></tr>
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<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Amidase Amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.4 3.5.1.4] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a1i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a1i OCA], [https://pdbe.org/3a1i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a1i RCSB], [https://www.ebi.ac.uk/pdbsum/3a1i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a1i ProSAT]</span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3a1i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a1i OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3a1i RCSB], [http://www.ebi.ac.uk/pdbsum/3a1i PDBsum]</span></td></tr>
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</table>
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<table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q7DKE4_9NOCA Q7DKE4_9NOCA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a1/3a1i_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a1/3a1i_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a1i ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 3a1i" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Amidase]]
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[[Category: Large Structures]]
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[[Category: Rhodococcus sp. n-771]]
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[[Category: Rhodococcus sp. N-771]]
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[[Category: Murata, K.]]
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[[Category: Murata K]]
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[[Category: Noguchi, K.]]
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[[Category: Noguchi K]]
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[[Category: Odaka, M.]]
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[[Category: Odaka M]]
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[[Category: Ohtaki, A.]]
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[[Category: Ohtaki A]]
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[[Category: Sato, Y.]]
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[[Category: Sato Y]]
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[[Category: Yohda, M.]]
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[[Category: Yohda M]]
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[[Category: Amidase]]
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[[Category: As family enzyme]]
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[[Category: Hydrolase]]
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Current revision

Crystal structure of Rhodococcus sp. N-771 Amidase complexed with Benzamide

PDB ID 3a1i

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