This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3a66

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:13, 1 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3a66' size='340' side='right'caption='[[3a66]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='3a66' size='340' side='right'caption='[[3a66]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3a66]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Flask Flask]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A66 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A66 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3a66]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Paenarthrobacter_ureafaciens Paenarthrobacter ureafaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A66 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A66 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACA:6-AMINOHEXANOIC+ACID'>ACA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1wyb|1wyb]], [[1wyc|1wyc]], [[2dcf|2dcf]], [[2zm0|2zm0]], [[2zma|2zma]], [[3a65|3a65]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACA:6-AMINOHEXANOIC+ACID'>ACA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nylB, NYLB' ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=261 FLASK])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/6-aminohexanoate-dimer_hydrolase 6-aminohexanoate-dimer hydrolase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.46 3.5.1.46] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a66 OCA], [https://pdbe.org/3a66 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a66 RCSB], [https://www.ebi.ac.uk/pdbsum/3a66 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a66 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a66 OCA], [https://pdbe.org/3a66 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a66 RCSB], [https://www.ebi.ac.uk/pdbsum/3a66 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a66 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NYLB2_FLASK NYLB2_FLASK] Involved in nylon oligomer degradation.<ref>PMID:6389532</ref> <ref>PMID:6646204</ref> [https://www.uniprot.org/uniprot/NYLB_FLASK NYLB_FLASK]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 23: Line 23:
==See Also==
==See Also==
*[[6-aminohexanoate-dimer hydrolase 3D structures|6-aminohexanoate-dimer hydrolase 3D structures]]
*[[6-aminohexanoate-dimer hydrolase 3D structures|6-aminohexanoate-dimer hydrolase 3D structures]]
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 6-aminohexanoate-dimer hydrolase]]
 
-
[[Category: Flask]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Higuchi, Y]]
+
[[Category: Paenarthrobacter ureafaciens]]
-
[[Category: Kawashima, Y]]
+
[[Category: Higuchi Y]]
-
[[Category: Negoro, S]]
+
[[Category: Kawashima Y]]
-
[[Category: Shibata, N]]
+
[[Category: Negoro S]]
-
[[Category: Takeo, M]]
+
[[Category: Shibata N]]
-
[[Category: Hydrolase]]
+
[[Category: Takeo M]]
-
[[Category: Nylon degradation]]
+

Current revision

Crystal structure of 6-aminohexanoate-dimer hydrolase S112A/G181D/H266N/D370Y mutant with substrate

PDB ID 3a66

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3a66"
Personal tools