This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ahz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:27, 1 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Tris==
==Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Tris==
-
<StructureSection load='3ahz' size='340' side='right' caption='[[3ahz]], [[Resolution|resolution]] 1.34&Aring;' scene=''>
+
<StructureSection load='3ahz' size='340' side='right'caption='[[3ahz]], [[Resolution|resolution]] 1.34&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3ahz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neotermes_koshunensis Neotermes koshunensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AHZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AHZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3ahz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neotermes_koshunensis Neotermes koshunensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AHZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AHZ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.34&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ahx|3ahx]], [[3ahy|3ahy]], [[3ai0|3ai0]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NkBG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=60586 Neotermes koshunensis])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ahz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ahz OCA], [https://pdbe.org/3ahz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ahz RCSB], [https://www.ebi.ac.uk/pdbsum/3ahz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ahz ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-glucosidase Beta-glucosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.21 3.2.1.21] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ahz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ahz OCA], [http://pdbe.org/3ahz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ahz RCSB], [http://www.ebi.ac.uk/pdbsum/3ahz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ahz ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8T0W7_9NEOP Q8T0W7_9NEOP]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ah/3ahz_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ah/3ahz_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 31: Line 31:
==See Also==
==See Also==
-
*[[Beta-glucosidase|Beta-glucosidase]]
+
*[[Beta-glucosidase 3D structures|Beta-glucosidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Beta-glucosidase]]
+
[[Category: Large Structures]]
[[Category: Neotermes koshunensis]]
[[Category: Neotermes koshunensis]]
-
[[Category: Jeng, W Y]]
+
[[Category: Jeng W-Y]]
-
[[Category: Liu, C I]]
+
[[Category: Liu C-I]]
-
[[Category: Wang, A H.J]]
+
[[Category: Wang AH-J]]
-
[[Category: Cellulase]]
+
-
[[Category: Glycosyl hydrolase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Manganese enhancement]]
+

Current revision

Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Tris

PDB ID 3ahz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3ahz"
Personal tools