This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3cq2
From Proteopedia
(Difference between revisions)
| (7 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:3cq2.jpg|left|200px]] | ||
| - | + | ==Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8== | |
| - | + | <StructureSection load='3cq2' size='340' side='right'caption='[[3cq2]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3cq2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CQ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CQ2 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cq2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cq2 OCA], [https://pdbe.org/3cq2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cq2 RCSB], [https://www.ebi.ac.uk/pdbsum/3cq2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cq2 ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/Q53W28_THET8 Q53W28_THET8] | |
| - | + | == Evolutionary Conservation == | |
| - | == | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cq/3cq2_consurf.spt"</scriptWhenChecked> |
| - | [[ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| - | [ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cq2 ConSurf]. |
| - | [ | + | <div style="clear:both"></div> |
| - | [[ | + | __TOC__ |
| - | [ | + | </StructureSection> |
| - | [[ | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Thermus thermophilus HB8]] |
| - | [[Category: | + | [[Category: Chen L]] |
| - | [[Category: | + | [[Category: Ebihara A]] |
| - | [[Category: | + | [[Category: Jeyakanthan J]] |
| - | [[Category: | + | [[Category: Kanaujia SP]] |
| - | [[Category: | + | [[Category: Kitamura Y]] |
| - | [[Category: | + | [[Category: Kuramitsu S]] |
| - | [[Category: | + | [[Category: Liu ZJ]] |
| - | [[Category: | + | [[Category: Satoh S]] |
| - | [[Category: | + | [[Category: Sekar K]] |
| - | [[Category: | + | [[Category: Wang BC]] |
| - | [[Category: | + | [[Category: Yokoyama S]] |
| - | + | ||
| - | + | ||
Current revision
Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8
| |||||||||||
Categories: Large Structures | Thermus thermophilus HB8 | Chen L | Ebihara A | Jeyakanthan J | Kanaujia SP | Kitamura Y | Kuramitsu S | Liu ZJ | Satoh S | Sekar K | Wang BC | Yokoyama S

