This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3d9w

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:05, 1 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure Analysis of Nocardia farcinica Arylamine N-acetyltransferase==
==Crystal Structure Analysis of Nocardia farcinica Arylamine N-acetyltransferase==
-
<StructureSection load='3d9w' size='340' side='right' caption='[[3d9w]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+
<StructureSection load='3d9w' size='340' side='right'caption='[[3d9w]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3d9w]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"actinomyces_bovis_farcinicus"_gasperini_1894 "actinomyces bovis farcinicus" gasperini 1894]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D9W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3D9W FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3d9w]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Nocardia_farcinica Nocardia farcinica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D9W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D9W FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nfa18420 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=37329 "Actinomyces bovis farcinicus" Gasperini 1894])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Arylamine_N-acetyltransferase Arylamine N-acetyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.5 2.3.1.5] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d9w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d9w OCA], [https://pdbe.org/3d9w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d9w RCSB], [https://www.ebi.ac.uk/pdbsum/3d9w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d9w ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3d9w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d9w OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3d9w RCSB], [http://www.ebi.ac.uk/pdbsum/3d9w PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5YYQ3_NOCFA Q5YYQ3_NOCFA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d9/3d9w_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d9/3d9w_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d9w ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 27:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3d9w" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Arylamine N-acetyltransferase|Arylamine N-acetyltransferase]]
+
*[[Arylamine N-acetyltransferase 3D structures|Arylamine N-acetyltransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Actinomyces bovis farcinicus gasperini 1894]]
+
[[Category: Large Structures]]
-
[[Category: Arylamine N-acetyltransferase]]
+
[[Category: Nocardia farcinica]]
-
[[Category: Dupret, J M]]
+
[[Category: Dupret JM]]
-
[[Category: Martins, M]]
+
[[Category: Li de la Sierra-Gallay I]]
-
[[Category: Pluvinage, B]]
+
[[Category: Martins M]]
-
[[Category: Rodrigues-Lima, F]]
+
[[Category: Pluvinage B]]
-
[[Category: Sierra-Gallay, I Li de la]]
+
[[Category: Rodrigues-Lima F]]
-
[[Category: Acyltransferase]]
+
-
[[Category: Arylamine n-acetyltransferase]]
+
-
[[Category: Nat]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal Structure Analysis of Nocardia farcinica Arylamine N-acetyltransferase

PDB ID 3d9w

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3d9w"
Personal tools