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3dc0
From Proteopedia
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| - | [[Image:3dc0.png|left|200px]] | ||
| - | + | ==Crystal structure of native alpha-amylase from Bacillus sp. KR-8104== | |
| - | + | <StructureSection load='3dc0' size='340' side='right'caption='[[3dc0]], [[Resolution|resolution]] 2.78Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3dc0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._KR-8104 Bacillus sp. KR-8104]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DC0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DC0 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.78Å</td></tr> | |
| - | == | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> |
| - | [[3dc0]] is a 1 chain structure | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dc0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dc0 OCA], [https://pdbe.org/3dc0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dc0 RCSB], [https://www.ebi.ac.uk/pdbsum/3dc0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dc0 ProSAT]</span></td></tr> |
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/B3GQD0_9BACI B3GQD0_9BACI] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dc0_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dc0 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[ | + | *[[Amylase 3D structures|Amylase 3D structures]] |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: Alikhajeh | + | [[Category: Bacillus sp. KR-8104]] |
| - | [[Category: Chen | + | [[Category: Large Structures]] |
| - | [[Category: Khajeh | + | [[Category: Alikhajeh J]] |
| - | [[Category: Naderi-Manesh | + | [[Category: Chen CJ]] |
| - | [[Category: Naderi-Manesh | + | [[Category: Khajeh K]] |
| - | [[Category: Ranjbar | + | [[Category: Naderi-Manesh H]] |
| - | + | [[Category: Naderi-Manesh M]] | |
| - | + | [[Category: Ranjbar B]] | |
Current revision
Crystal structure of native alpha-amylase from Bacillus sp. KR-8104
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