This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3di9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:09, 1 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3di9' size='340' side='right'caption='[[3di9]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='3di9' size='340' side='right'caption='[[3di9]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3di9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bovin Bovin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DI9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DI9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3di9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DI9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DI9 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3dh5|3dh5]], [[3dh6|3dh6]], [[3di7|3di7]], [[3di8|3di8]], [[3dib|3dib]], [[3dic|3dic]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RNASE1, RNS1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9913 BOVIN])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Pancreatic_ribonuclease Pancreatic ribonuclease], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.27.5 3.1.27.5] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3di9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3di9 OCA], [https://pdbe.org/3di9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3di9 RCSB], [https://www.ebi.ac.uk/pdbsum/3di9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3di9 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3di9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3di9 OCA], [https://pdbe.org/3di9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3di9 RCSB], [https://www.ebi.ac.uk/pdbsum/3di9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3di9 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/RNAS1_BOVIN RNAS1_BOVIN]] Endonuclease that catalyzes the cleavage of RNA on the 3' side of pyrimidine nucleotides. Acts on single stranded and double stranded RNA.<ref>PMID:7479688</ref>
+
[https://www.uniprot.org/uniprot/RNAS1_BOVIN RNAS1_BOVIN] Endonuclease that catalyzes the cleavage of RNA on the 3' side of pyrimidine nucleotides. Acts on single stranded and double stranded RNA.<ref>PMID:7479688</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 38: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bovin]]
+
[[Category: Bos taurus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pancreatic ribonuclease]]
+
[[Category: Font J]]
-
[[Category: Font, J]]
+
[[Category: Kurpiewska K]]
-
[[Category: Kurpiewska, K]]
+
[[Category: Lewinski K]]
-
[[Category: Lewinski, K]]
+
[[Category: Ribo M]]
-
[[Category: Ribo, M]]
+
[[Category: Vilanova M]]
-
[[Category: Vilanova, M]]
+
-
[[Category: Bovine pancrea]]
+
-
[[Category: Endonuclease]]
+
-
[[Category: Glycation]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Nuclease]]
+
-
[[Category: Ribonuclease]]
+
-
[[Category: Rnase some]]
+
-
[[Category: Secreted]]
+

Current revision

Crystal structure of bovine pancreatic ribonuclease A variant (I81A)

PDB ID 3di9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3di9"
Personal tools