This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3djw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:11, 1 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==The thermo- and acido-stable ORF-99 from the archaeal virus AFV1==
==The thermo- and acido-stable ORF-99 from the archaeal virus AFV1==
-
<StructureSection load='3djw' size='340' side='right' caption='[[3djw]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
+
<StructureSection load='3djw' size='340' side='right'caption='[[3djw]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3djw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Afv-1 Afv-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DJW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DJW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3djw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidianus_filamentous_virus_1 Acidianus filamentous virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DJW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DJW FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3df6|3df6]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ORF99 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=235266 AFV-1])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3djw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3djw OCA], [https://pdbe.org/3djw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3djw RCSB], [https://www.ebi.ac.uk/pdbsum/3djw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3djw ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3djw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3djw OCA], [http://pdbe.org/3djw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3djw RCSB], [http://www.ebi.ac.uk/pdbsum/3djw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3djw ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Y099_AFV1Y Y099_AFV1Y]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Afv-1]]
+
[[Category: Acidianus filamentous virus 1]]
-
[[Category: Cambillau, C]]
+
[[Category: Large Structures]]
-
[[Category: Campanacci, V]]
+
[[Category: Cambillau C]]
-
[[Category: Goulet, A]]
+
[[Category: Campanacci V]]
-
[[Category: Prangishvili, D]]
+
[[Category: Goulet A]]
-
[[Category: Spinelli, S]]
+
[[Category: Prangishvili D]]
-
[[Category: Tilbeurgh, H van]]
+
[[Category: Spinelli S]]
-
[[Category: Archaeal virus]]
+
[[Category: Van Tilbeurgh H]]
-
[[Category: Extremophile]]
+
-
[[Category: Lipothrixviridae]]
+
-
[[Category: Protein fold]]
+
-
[[Category: Unknown function]]
+
-
[[Category: Viral protein]]
+

Current revision

The thermo- and acido-stable ORF-99 from the archaeal virus AFV1

PDB ID 3djw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools