This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3fg5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3fg5" [edit=sysop:move=sysop])
Current revision (15:29, 1 November 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3fg5.png|left|200px]]
 
-
<!--
+
==Crystal structure determination of a ternary complex of phospholipase A2 with a pentapeptide FLSYK and Ajmaline at 2.5 A resolution==
-
The line below this paragraph, containing "STRUCTURE_3fg5", creates the "Structure Box" on the page.
+
<StructureSection load='3fg5' size='340' side='right'caption='[[3fg5]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3fg5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Daboia_russelii_pulchella Daboia russelii pulchella]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FG5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FG5 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AJM:AJMALINE'>AJM</scene></td></tr>
-
{{STRUCTURE_3fg5| PDB=3fg5 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fg5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fg5 OCA], [https://pdbe.org/3fg5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fg5 RCSB], [https://www.ebi.ac.uk/pdbsum/3fg5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fg5 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure determination of a ternary complex of phospholipase A2 with a pentapetide FLSYK and Ajmaline at 2.5 A resolution===
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
[[3fg5]] is a 2 chain structure of [[Phospholipase A2]] with sequence from [http://en.wikipedia.org/wiki/Daboia_russellii_pulchella Daboia russellii pulchella]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FG5 OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fg/3fg5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fg5 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Phospholipase A2]]
+
*[[Phospholipase A2 3D structures|Phospholipase A2 3D structures]]
-
[[Category: Daboia russellii pulchella]]
+
__TOC__
-
[[Category: Bhushan, A.]]
+
</StructureSection>
-
[[Category: Kaur, P.]]
+
[[Category: Daboia russelii pulchella]]
-
[[Category: Kumar, M.]]
+
[[Category: Large Structures]]
-
[[Category: Kumar, S.]]
+
[[Category: Bhushan A]]
-
[[Category: Sharma, S.]]
+
[[Category: Kaur P]]
-
[[Category: Singh, N.]]
+
[[Category: Kumar M]]
-
[[Category: Singh, T P.]]
+
[[Category: Kumar S]]
-
[[Category: Sinha, M.]]
+
[[Category: Sharma S]]
-
[[Category: Srinivasan, A.]]
+
[[Category: Singh N]]
-
[[Category: Vikram, G.]]
+
[[Category: Singh TP]]
-
[[Category: Ajmaline]]
+
[[Category: Sinha M]]
-
[[Category: Flsyk]]
+
[[Category: Srinivasan A]]
-
[[Category: Hydrolase]]
+
[[Category: Vikram G]]
-
[[Category: Pentapeptide]]
+
-
[[Category: Pla2]]
+
-
[[Category: Ternary complex]]
+

Current revision

Crystal structure determination of a ternary complex of phospholipase A2 with a pentapeptide FLSYK and Ajmaline at 2.5 A resolution

PDB ID 3fg5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3fg5"
Personal tools