This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3fvl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3fvl" [edit=sysop:move=sysop])
Current revision (15:32, 1 November 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3fvl.png|left|200px]]
 
-
{{STRUCTURE_3fvl| PDB=3fvl | SCENE= }}
+
==Crystallogic studies on the Complex of Carboxypeptidase A with inhibitors using alpha-hydroxy ketone as zinc-binding group==
-
 
+
<StructureSection load='3fvl' size='340' side='right'caption='[[3fvl]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
===Crystallogic studies on the Complex of Carboxypeptidase A with inhibitors using alpha-hydroxy ketone as zinc-binding group===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3fvl]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FVL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FVL FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BHK:(2R)-2-BENZYL-5-HYDROXY-4-OXOPENTANOIC+ACID'>BHK</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[3fvl]] is a 3 chain structure of [[Carboxypeptidase]] with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FVL OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fvl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fvl OCA], [https://pdbe.org/3fvl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fvl RCSB], [https://www.ebi.ac.uk/pdbsum/3fvl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fvl ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CBPA1_BOVIN CBPA1_BOVIN] Carboxypeptidase that catalyzes the release of a C-terminal amino acid, but has little or no action with -Asp, -Glu, -Arg, -Lys or -Pro (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fv/3fvl_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fvl ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Carboxypeptidase|Carboxypeptidase]]
+
*[[Carboxypeptidase 3D structures|Carboxypeptidase 3D structures]]
 +
__TOC__
 +
</StructureSection>
[[Category: Bos taurus]]
[[Category: Bos taurus]]
-
[[Category: Carboxypeptidase A]]
+
[[Category: Large Structures]]
-
[[Category: Jin, J Y.]]
+
[[Category: Jin J-Y]]
-
[[Category: Tian, G R.]]
+
[[Category: Tian GR]]
-
[[Category: Wang, S F.]]
+
[[Category: Wang SF]]
-
[[Category: Alpha-hydroxy ketone]]
+
-
[[Category: Carboxypeptidase]]
+
-
[[Category: Carboxypeptidase some]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Inhibitor]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Metalloprotease]]
+
-
[[Category: Protease]]
+
-
[[Category: Secreted]]
+
-
[[Category: Zymogen]]
+

Current revision

Crystallogic studies on the Complex of Carboxypeptidase A with inhibitors using alpha-hydroxy ketone as zinc-binding group

PDB ID 3fvl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools