This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ju0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:05, 1 November 2023) (edit) (undo)
 
Line 1: Line 1:
==Structure of the arm-type binding domain of HAI7 integrase==
==Structure of the arm-type binding domain of HAI7 integrase==
-
<StructureSection load='3ju0' size='340' side='right' caption='[[3ju0]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+
<StructureSection load='3ju0' size='340' side='right'caption='[[3ju0]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3ju0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_atrosepticus"_van_hall_1902 "bacillus atrosepticus" van hall 1902]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JU0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JU0 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3ju0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pectobacterium_atrosepticum Pectobacterium atrosepticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JU0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JU0 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3jtz|3jtz]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">intB, ECA1679 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29471 "Bacillus atrosepticus" van Hall 1902])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ju0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ju0 OCA], [https://pdbe.org/3ju0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ju0 RCSB], [https://www.ebi.ac.uk/pdbsum/3ju0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ju0 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ju0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ju0 OCA], [http://pdbe.org/3ju0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ju0 RCSB], [http://www.ebi.ac.uk/pdbsum/3ju0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ju0 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6D6K1_PECAS Q6D6K1_PECAS]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ju/3ju0_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ju/3ju0_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 27: Line 28:
</div>
</div>
<div class="pdbe-citations 3ju0" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3ju0" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Retroviral integrase 3D structures|Retroviral integrase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus atrosepticus van hall 1902]]
+
[[Category: Large Structures]]
-
[[Category: Antonenka, U]]
+
[[Category: Pectobacterium atrosepticum]]
-
[[Category: Holak, T A]]
+
[[Category: Antonenka U]]
-
[[Category: Popowicz, G M]]
+
[[Category: Holak TA]]
-
[[Category: Rakin, A]]
+
[[Category: Popowicz GM]]
-
[[Category: Sitar, T]]
+
[[Category: Rakin A]]
-
[[Category: Szwagierczak, A]]
+
[[Category: Sitar T]]
-
[[Category: Dna binding protein]]
+
[[Category: Szwagierczak A]]
-
[[Category: Four stranded beta-sheet]]
+

Current revision

Structure of the arm-type binding domain of HAI7 integrase

PDB ID 3ju0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools