This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3qj4
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of Human Renalase (isoform 1)== | ==Crystal structure of Human Renalase (isoform 1)== | ||
| - | <StructureSection load='3qj4' size='340' side='right' caption='[[3qj4]], [[Resolution|resolution]] 2.50Å' scene=''> | + | <StructureSection load='3qj4' size='340' side='right'caption='[[3qj4]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3qj4]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3qj4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QJ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QJ4 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qj4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qj4 OCA], [https://pdbe.org/3qj4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qj4 RCSB], [https://www.ebi.ac.uk/pdbsum/3qj4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qj4 ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/RNLS_HUMAN RNLS_HUMAN] Probable FAD-dependent amine oxidase secreted by the kidney, which circulates in blood and modulates cardiac function and systemic blood pressure. Degrades catecholamines such as dopamine, norepinephrine and epinephrine in vitro. Lowers blood pressure in vivo by decreasing cardiac contractility and heart rate and preventing a compensatory increase in peripheral vascular tone, suggesting a causal link to the increased plasma catecholamine and heightened cardiovascular risk. High concentrations of catecholamines activate plasma renalase and promotes its secretion and synthesis (By similarity). According to PubMed:17385068, is unlikely that renalase has physiologically relevant catecholamine-oxidizing activity.<ref>PMID:15841207</ref> <ref>PMID:17385068</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 15: | Line 18: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 3qj4" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| Line 23: | Line 27: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: Aliverti | + | [[Category: Large Structures]] |
| - | [[Category: Baroni | + | [[Category: Aliverti A]] |
| - | [[Category: Bolognesi | + | [[Category: Baroni S]] |
| - | [[Category: Canevari | + | [[Category: Bolognesi M]] |
| - | [[Category: Ciriello | + | [[Category: Canevari G]] |
| - | [[Category: Milani | + | [[Category: Ciriello F]] |
| - | [[Category: Pandini | + | [[Category: Milani M]] |
| - | + | [[Category: Pandini V]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of Human Renalase (isoform 1)
| |||||||||||
Categories: Homo sapiens | Large Structures | Aliverti A | Baroni S | Bolognesi M | Canevari G | Ciriello F | Milani M | Pandini V
