This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3tkq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:33, 1 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of full-length human peroxiredoxin 4 with mixed conformation==
==Crystal structure of full-length human peroxiredoxin 4 with mixed conformation==
-
<StructureSection load='3tkq' size='340' side='right' caption='[[3tkq]], [[Resolution|resolution]] 2.22&Aring;' scene=''>
+
<StructureSection load='3tkq' size='340' side='right'caption='[[3tkq]], [[Resolution|resolution]] 2.22&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3tkq]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TKQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3TKQ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3tkq]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TKQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TKQ FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2pn8|2pn8]], [[3tkp|3tkp]], [[3tkr|3tkr]], [[3tks|3tks]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.22&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PRDX4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tkq OCA], [https://pdbe.org/3tkq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tkq RCSB], [https://www.ebi.ac.uk/pdbsum/3tkq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tkq ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxiredoxin Peroxiredoxin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.15 1.11.1.15] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tkq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3tkq RCSB], [http://www.ebi.ac.uk/pdbsum/3tkq PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PRDX4_HUMAN PRDX4_HUMAN]] Probably involved in redox regulation of the cell. Regulates the activation of NF-kappa-B in the cytosol by a modulation of I-kappa-B-alpha phosphorylation.<ref>PMID:9388242</ref>
+
[https://www.uniprot.org/uniprot/PRDX4_HUMAN PRDX4_HUMAN] Probably involved in redox regulation of the cell. Regulates the activation of NF-kappa-B in the cytosol by a modulation of I-kappa-B-alpha phosphorylation.<ref>PMID:9388242</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 17:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3tkq" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Peroxiredoxin|Peroxiredoxin]]
+
*[[Peroxiredoxin 3D structures|Peroxiredoxin 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 26: Line 26:
</StructureSection>
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Peroxiredoxin]]
+
[[Category: Large Structures]]
-
[[Category: Sun, F]]
+
[[Category: Sun F]]
-
[[Category: Wang, C C]]
+
[[Category: Wang C-C]]
-
[[Category: Wang, L]]
+
[[Category: Wang L]]
-
[[Category: Wang, X]]
+
[[Category: Wang X]]
-
[[Category: Oxidoreductase]]
+
-
[[Category: Trx fold]]
+

Current revision

Crystal structure of full-length human peroxiredoxin 4 with mixed conformation

PDB ID 3tkq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools