This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5m5g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:26, 1 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5m5g' size='340' side='right'caption='[[5m5g]], [[Resolution|resolution]] 2.27&Aring;' scene=''>
<StructureSection load='5m5g' size='340' side='right'caption='[[5m5g]], [[Resolution|resolution]] 2.27&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5m5g]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Chatd Chatd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M5G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5M5G FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5m5g]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Chaetomium_thermophilum_var._thermophilum_DSM_1495 Chaetomium thermophilum var. thermophilum DSM 1495] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M5G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5M5G FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.27&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ch1|5ch1]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5m5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m5g OCA], [https://pdbe.org/5m5g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5m5g RCSB], [https://www.ebi.ac.uk/pdbsum/5m5g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5m5g ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CTHT_0029920 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 CHATD]), CTHT_0053230 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 CHATD])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5m5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m5g OCA], [http://pdbe.org/5m5g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m5g RCSB], [http://www.ebi.ac.uk/pdbsum/5m5g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m5g ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/G0S8H7_CHATD G0S8H7_CHATD]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Chatd]]
+
[[Category: Chaetomium thermophilum var. thermophilum DSM 1495]]
 +
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Gamblin, S]]
+
[[Category: Gamblin S]]
-
[[Category: Justin, N]]
+
[[Category: Justin N]]
-
[[Category: Wilson, J]]
+
[[Category: Wilson J]]
-
[[Category: Zhang, Y]]
+
[[Category: Zhang Y]]
-
[[Category: Complex]]
+
-
[[Category: Repressive]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of the Chaetomium Thermophilum polycomb repressive complex 2 (PRC2)

PDB ID 5m5g

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools