5m6s

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'''Unreleased structure'''
 
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The entry 5m6s is ON HOLD
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==folding intermediate of spectrin R16==
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<SX load='5m6s' size='340' side='right' viewer='molstar' caption='[[5m6s]], [[Resolution|resolution]] 4.80&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5m6s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M6S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5M6S FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.8&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5m6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m6s OCA], [https://pdbe.org/5m6s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5m6s RCSB], [https://www.ebi.ac.uk/pdbsum/5m6s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5m6s ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/LPTN_ECOLI LPTN_ECOLI] Required for tryptophan-regulated expression of the tna operon. In the presence of free L-Trp release of this nascent peptide by release factor 2 is inhibited and the ribosome stalls with the last amino acid in the P site and a UGA stop codon in the A site. This prevent transcripiton termination factor Rho binding, and thus allows transcription and translation of TnaA and TnaB.[https://www.uniprot.org/uniprot/SPTN1_CHICK SPTN1_CHICK] Morphologically, spectrin-like proteins appear to be related to spectrin, showing a flexible rod-like structure. They can bind actin but seem to differ in their calmodulin-binding activity. In nonerythroid tissues, spectrins, in association with some other proteins, may play an important role in membrane organization.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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How do the key features of protein folding, elucidated from studies on native, isolated proteins, manifest in cotranslational folding on the ribosome? Using a well-characterized family of homologous alpha-helical proteins with a range of biophysical properties, we show that spectrin domains can fold vectorially on the ribosome and may do so via a pathway different from that of the isolated domain. We use cryo-EM to reveal a folded or partially folded structure, formed in the vestibule of the ribosome. Our results reveal that it is not possible to predict which domains will fold within the ribosome on the basis of the folding behavior of isolated domains; instead, we propose that a complex balance of the rate of folding, the rate of translation and the lifetime of folded or partly folded states will determine whether folding occurs cotranslationally on actively translating ribosomes.
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Authors: Nilsson, O.B., Nickson, A.A., Clarke, J.
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Cotranslational folding of spectrin domains via partially structured states.,Nilsson OB, Nickson AA, Hollins JJ, Wickles S, Steward A, Beckmann R, von Heijne G, Clarke J Nat Struct Mol Biol. 2017 Jan 23. doi: 10.1038/nsmb.3355. PMID:28112730<ref>PMID:28112730</ref>
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Description: folding intermediate of spectrin R16
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Nilsson, O.B]]
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<div class="pdbe-citations 5m6s" style="background-color:#fffaf0;"></div>
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[[Category: Nickson, A.A]]
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[[Category: Clarke, J]]
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==See Also==
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*[[Spectrin 3D structures|Spectrin 3D structures]]
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== References ==
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<references/>
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__TOC__
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</SX>
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[[Category: Escherichia coli]]
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[[Category: Large Structures]]
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[[Category: Clarke J]]
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[[Category: Nickson AA]]
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[[Category: Nilsson OB]]

Current revision

folding intermediate of spectrin R16

5m6s, resolution 4.80Å

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