This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5m77

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:28, 1 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5m77' size='340' side='right'caption='[[5m77]], [[Resolution|resolution]] 1.46&Aring;' scene=''>
<StructureSection load='5m77' size='340' side='right'caption='[[5m77]], [[Resolution|resolution]] 1.46&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5m77]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_24 Atcc 24]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M77 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5M77 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5m77]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Niallia_circulans Niallia circulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M77 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5M77 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.46&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=7K2:'>7K2</scene>, <scene name='pdbligand=7K3:'>7K3</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7K2:[(3S,4R,5R)-4,5-dihydroxypiperidin-3-yl]methyl+1-thio-alpha-D-mannopyranoside'>7K2</scene>, <scene name='pdbligand=7K3:1-thio-alpha-D-mannopyranose'>7K3</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aman6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1397 ATCC 24])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5m77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m77 OCA], [https://pdbe.org/5m77 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5m77 RCSB], [https://www.ebi.ac.uk/pdbsum/5m77 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5m77 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5m77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m77 OCA], [http://pdbe.org/5m77 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m77 RCSB], [http://www.ebi.ac.uk/pdbsum/5m77 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m77 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9Z4P9_NIACI Q9Z4P9_NIACI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 24]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Davies, G]]
+
[[Category: Niallia circulans]]
-
[[Category: Jin, Y]]
+
[[Category: Davies G]]
-
[[Category: Williams, S]]
+
[[Category: Jin Y]]
-
[[Category: Complex]]
+
[[Category: Williams S]]
-
[[Category: Glycoside hydrolase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Mannanase]]
+
-
[[Category: S-linked polysaccharide]]
+

Current revision

a GH76 family enzyme structure

PDB ID 5m77

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools