5m9n

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(New page: ==Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide== <StructureSection load='5m9n' size='340' side='right' caption='5m9n...)
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==Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide==
==Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide==
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<StructureSection load='5m9n' size='340' side='right' caption='[[5m9n]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
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<StructureSection load='5m9n' size='340' side='right'caption='[[5m9n]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5m9n]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M9N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5M9N FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5m9n]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M9N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5M9N FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=2MR:N3,+N4-DIMETHYLARGININE'>2MR</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5m9n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m9n OCA], [http://pdbe.org/5m9n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m9n RCSB], [http://www.ebi.ac.uk/pdbsum/5m9n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m9n ProSAT]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2MR:N3,+N4-DIMETHYLARGININE'>2MR</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5m9n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m9n OCA], [https://pdbe.org/5m9n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5m9n RCSB], [https://www.ebi.ac.uk/pdbsum/5m9n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5m9n ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/TDRD1_HUMAN TDRD1_HUMAN]] Plays a central role during spermatogenesis by participating in the repression transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Required for the localization of Piwi proteins to the meiotic nuage. Involved in the piRNA metabolic process by ensuring the entry of correct transcripts into the normal piRNA pool and limiting the entry of cellular transcripts into the piRNA pathway. May act by allowing the recruitment of piRNA biogenesis or loading factors that ensure the correct entry of transcripts and piRNAs into Piwi proteins (By similarity).
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[https://www.uniprot.org/uniprot/TDRD1_HUMAN TDRD1_HUMAN] Plays a central role during spermatogenesis by participating in the repression transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Required for the localization of Piwi proteins to the meiotic nuage. Involved in the piRNA metabolic process by ensuring the entry of correct transcripts into the normal piRNA pool and limiting the entry of cellular transcripts into the piRNA pathway. May act by allowing the recruitment of piRNA biogenesis or loading factors that ensure the correct entry of transcripts and piRNAs into Piwi proteins (By similarity).
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Arrowsmith, C H]]
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[[Category: Homo sapiens]]
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[[Category: Bountra, C]]
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[[Category: Large Structures]]
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[[Category: Chan, C]]
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[[Category: Arrowsmith CH]]
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[[Category: Delft, F von]]
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[[Category: Bountra C]]
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[[Category: Edwards, A M]]
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[[Category: Chan C]]
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[[Category: Fedorov, O]]
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[[Category: Edwards AM]]
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[[Category: Knapp, S]]
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[[Category: Fedorov O]]
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[[Category: Moehlenbrink, J]]
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[[Category: Knapp S]]
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[[Category: Newman, J A]]
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[[Category: La Thangue NB]]
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[[Category: Nunez-Alonso, G]]
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[[Category: Moehlenbrink J]]
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[[Category: Structural genomic]]
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[[Category: Newman JA]]
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[[Category: Savitsky, P]]
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[[Category: Nunez-Alonso G]]
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[[Category: Tallant, C]]
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[[Category: Savitsky P]]
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[[Category: Thangue, N B.La]]
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[[Category: Tallant C]]
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[[Category: Rna-mediated gene silencing]]
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[[Category: Von Delft F]]
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[[Category: Sgc]]
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[[Category: Structural protein]]
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Current revision

Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide

PDB ID 5m9n

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