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| | <StructureSection load='5mg8' size='340' side='right'caption='[[5mg8]], [[Resolution|resolution]] 2.75Å' scene=''> | | <StructureSection load='5mg8' size='340' side='right'caption='[[5mg8]], [[Resolution|resolution]] 2.75Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[5mg8]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MG8 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5MG8 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5mg8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Schizosaccharomyces_pombe Schizosaccharomyces pombe]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MG8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MG8 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5mg8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mg8 OCA], [http://pdbe.org/5mg8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mg8 RCSB], [http://www.ebi.ac.uk/pdbsum/5mg8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mg8 ProSAT]</span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mg8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mg8 OCA], [https://pdbe.org/5mg8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mg8 RCSB], [https://www.ebi.ac.uk/pdbsum/5mg8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mg8 ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/SMC5_SCHPO SMC5_SCHPO]] Acts in a DNA repair pathway for removal of UV-induced DNA damage that is distinct from classical nucleotide excision repair and in repair of ionizing radiation damage. Functions in homologous recombination repair of DNA double strand breaks and in recovery of stalled replication forks. Plays a critical role in meiosis. [[http://www.uniprot.org/uniprot/SMC6_SCHPO SMC6_SCHPO]] Acts in a DNA repair pathway for removal of UV-induced DNA damage that is distinct from classical nucleotide excision repair and in repair of ionizing radiation damage. Functions in homologous recombination repair of DNA double strand breaks and in recovery of stalled replication forks. Plays a critical role in meiosis.<ref>PMID:10473635</ref> | + | [https://www.uniprot.org/uniprot/SMC5_SCHPO SMC5_SCHPO] Acts in a DNA repair pathway for removal of UV-induced DNA damage that is distinct from classical nucleotide excision repair and in repair of ionizing radiation damage. Functions in homologous recombination repair of DNA double strand breaks and in recovery of stalled replication forks. Plays a critical role in meiosis. |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | </StructureSection> | | </StructureSection> |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Alt, A]] | + | [[Category: Schizosaccharomyces pombe]] |
| - | [[Category: Oliver, A W]] | + | [[Category: Alt A]] |
| - | [[Category: Pearl, L H]] | + | [[Category: Oliver AW]] |
| - | [[Category: Hinge domain]] | + | [[Category: Pearl LH]] |
| - | [[Category: Recombination]]
| + | |
| - | [[Category: Smc]]
| + | |
| - | [[Category: Smc5]]
| + | |
| - | [[Category: Smc5/6]]
| + | |
| - | [[Category: Smc6]]
| + | |
| - | [[Category: Structural maintenance of chromosome]]
| + | |
| Structural highlights
Function
SMC5_SCHPO Acts in a DNA repair pathway for removal of UV-induced DNA damage that is distinct from classical nucleotide excision repair and in repair of ionizing radiation damage. Functions in homologous recombination repair of DNA double strand breaks and in recovery of stalled replication forks. Plays a critical role in meiosis.
Publication Abstract from PubMed
The Structural Maintenance of Chromosomes (SMC) complexes: cohesin, condensin and Smc5/6 are involved in the organization of higher-order chromosome structure-which is essential for accurate chromosome duplication and segregation. Each complex is scaffolded by a specific SMC protein dimer (heterodimer in eukaryotes) held together via their hinge domains. Here we show that the Smc5/6-hinge, like those of cohesin and condensin, also forms a toroidal structure but with distinctive subunit interfaces absent from the other SMC complexes; an unusual 'molecular latch' and a functional 'hub'. Defined mutations in these interfaces cause severe phenotypic effects with sensitivity to DNA-damaging agents in fission yeast and reduced viability in human cells. We show that the Smc5/6-hinge complex binds preferentially to ssDNA and that this interaction is affected by both 'latch' and 'hub' mutations, suggesting a key role for these unique features in controlling DNA association by the Smc5/6 complex.
Specialized interfaces of Smc5/6 control hinge stability and DNA association.,Alt A, Dang HQ, Wells OS, Polo LM, Smith MA, McGregor GA, Welte T, Lehmann AR, Pearl LH, Murray JM, Oliver AW Nat Commun. 2017 Jan 30;8:14011. doi: 10.1038/ncomms14011. PMID:28134253[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Alt A, Dang HQ, Wells OS, Polo LM, Smith MA, McGregor GA, Welte T, Lehmann AR, Pearl LH, Murray JM, Oliver AW. Specialized interfaces of Smc5/6 control hinge stability and DNA association. Nat Commun. 2017 Jan 30;8:14011. doi: 10.1038/ncomms14011. PMID:28134253 doi:http://dx.doi.org/10.1038/ncomms14011
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