This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3vdu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:18, 8 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of recombination mediator protein RecRK21G mutant==
==Structure of recombination mediator protein RecRK21G mutant==
-
<StructureSection load='3vdu' size='340' side='right' caption='[[3vdu]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+
<StructureSection load='3vdu' size='340' side='right'caption='[[3vdu]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3vdu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermoanaerobacter_tengcongensis_mb4 Thermoanaerobacter tengcongensis mb4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VDU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3vdu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis_MB4 Caldanaerobacter subterraneus subsp. tengcongensis MB4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VDU FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vdp|3vdp]], [[3vds|3vds]], [[3vdt|3vdt]], [[3ve5|3ve5]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">recR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273068 Thermoanaerobacter tengcongensis MB4])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdu OCA], [https://pdbe.org/3vdu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vdu RCSB], [https://www.ebi.ac.uk/pdbsum/3vdu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vdu ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vdu RCSB], [http://www.ebi.ac.uk/pdbsum/3vdu PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RECR_CALS4 RECR_CALS4] May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.[HAMAP-Rule:MF_00017]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3vdu" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Thermoanaerobacter tengcongensis mb4]]
+
[[Category: Caldanaerobacter subterraneus subsp. tengcongensis MB4]]
-
[[Category: Liang, D C]]
+
[[Category: Large Structures]]
-
[[Category: Tang, Q]]
+
[[Category: Liang DC]]
-
[[Category: Yan, X X]]
+
[[Category: Tang Q]]
-
[[Category: Dna binding]]
+
[[Category: Yan XX]]
-
[[Category: Dna repair]]
+
-
[[Category: Recombination]]
+
-
[[Category: Zinc finger]]
+

Current revision

Structure of recombination mediator protein RecRK21G mutant

PDB ID 3vdu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3vdu"
Personal tools