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3vk4

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<StructureSection load='3vk4' size='340' side='right'caption='[[3vk4]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
<StructureSection load='3vk4' size='340' side='right'caption='[[3vk4]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3vk4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_fluorescens_putidus"_flugge_1886 "bacillus fluorescens putidus" flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VK4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VK4 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3vk4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VK4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VK4 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HCS:2-AMINO-4-MERCAPTO-BUTYRIC+ACID'>HCS</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.61&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HCS:2-AMINO-4-MERCAPTO-BUTYRIC+ACID'>HCS</scene>, <scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2o7c|2o7c]], [[3vk2|3vk2]], [[3vk3|3vk3]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mdeA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=303 "Bacillus fluorescens putidus" Flugge 1886])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vk4 OCA], [https://pdbe.org/3vk4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vk4 RCSB], [https://www.ebi.ac.uk/pdbsum/3vk4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vk4 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vk4 OCA], [https://pdbe.org/3vk4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vk4 RCSB], [https://www.ebi.ac.uk/pdbsum/3vk4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vk4 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MEGL_PSEPU MEGL_PSEPU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus fluorescens putidus flugge 1886]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Methionine gamma-lyase]]
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[[Category: Pseudomonas putida]]
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[[Category: Fukumoto, M]]
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[[Category: Fukumoto M]]
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[[Category: Harada, S]]
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[[Category: Harada S]]
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[[Category: Inagaki, K]]
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[[Category: Inagaki K]]
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[[Category: Kudou, D]]
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[[Category: Kudou D]]
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[[Category: Murano, S]]
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[[Category: Murano S]]
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[[Category: Sato, D]]
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[[Category: Sato D]]
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[[Category: Shiba, T]]
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[[Category: Shiba T]]
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[[Category: Tamura, T]]
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[[Category: Tamura T]]
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[[Category: Lyase]]
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[[Category: Plp]]
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[[Category: Plp-dependent enzyme]]
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Revision as of 12:24, 8 November 2023

Crystal Structure of L-Methionine gamma-Lyase from Pseudomonas putida C116H Mutant complexed with L-homocysteine

PDB ID 3vk4

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