This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3w02

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:43, 8 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of PcrB complexed with SO4 from Staphylococcus aureus subsp. aureus Mu3==
==Crystal structure of PcrB complexed with SO4 from Staphylococcus aureus subsp. aureus Mu3==
-
<StructureSection load='3w02' size='340' side='right' caption='[[3w02]], [[Resolution|resolution]] 2.98&Aring;' scene=''>
+
<StructureSection load='3w02' size='340' side='right'caption='[[3w02]], [[Resolution|resolution]] 2.98&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3w02]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staa1 Staa1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W02 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3W02 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3w02]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_Mu3 Staphylococcus aureus subsp. aureus Mu3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W02 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W02 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.98&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vzx|3vzx]], [[3vzy|3vzy]], [[3vzz|3vzz]], [[3w00|3w00]], [[3w01|3w01]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pcrB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=418127 STAA1])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w02 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w02 OCA], [https://pdbe.org/3w02 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w02 RCSB], [https://www.ebi.ac.uk/pdbsum/3w02 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w02 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3w02 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w02 OCA], [http://pdbe.org/3w02 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3w02 RCSB], [http://www.ebi.ac.uk/pdbsum/3w02 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3w02 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PCRB_STAA1 PCRB_STAA1]] Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales (By similarity).
+
[https://www.uniprot.org/uniprot/PCRB_STAA1 PCRB_STAA1] Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Staa1]]
+
[[Category: Large Structures]]
-
[[Category: Chan, H C]]
+
[[Category: Staphylococcus aureus subsp. aureus Mu3]]
-
[[Category: Chen, C C]]
+
[[Category: Chan HC]]
-
[[Category: Feng, X]]
+
[[Category: Chen CC]]
-
[[Category: Guo, R T]]
+
[[Category: Feng X]]
-
[[Category: He, M]]
+
[[Category: Guo RT]]
-
[[Category: Hu, Y]]
+
[[Category: He M]]
-
[[Category: Huang, C H]]
+
[[Category: Hu Y]]
-
[[Category: Ko, T P]]
+
[[Category: Huang CH]]
-
[[Category: Li, Y]]
+
[[Category: Ko TP]]
-
[[Category: Liu, Y L]]
+
[[Category: Li Y]]
-
[[Category: Oldfield, E]]
+
[[Category: Liu YL]]
-
[[Category: Pang, X]]
+
[[Category: Oldfield E]]
-
[[Category: Ren, F]]
+
[[Category: Pang X]]
-
[[Category: Wang, K]]
+
[[Category: Ren F]]
-
[[Category: Biosynthesis]]
+
[[Category: Wang K]]
-
[[Category: Enzyme catalysis]]
+
-
[[Category: Prenyltransferase]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of PcrB complexed with SO4 from Staphylococcus aureus subsp. aureus Mu3

PDB ID 3w02

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3w02"
Personal tools