This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3w28

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:46, 8 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylotriose==
==The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylotriose==
-
<StructureSection load='3w28' size='340' side='right' caption='[[3w28]], [[Resolution|resolution]] 1.39&Aring;' scene=''>
+
<StructureSection load='3w28' size='340' side='right'caption='[[3w28]], [[Resolution|resolution]] 1.39&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3w28]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermoanaerobacterium_saccharolyticum_jw/sl-ys485 Thermoanaerobacterium saccharolyticum jw/sl-ys485]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W28 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3W28 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3w28]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 Thermoanaerobacterium saccharolyticum JW/SL-YS485]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W28 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W28 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=XYS:XYLOPYRANOSE'>XYS</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.39&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3w24|3w24]], [[3w25|3w25]], [[3w26|3w26]], [[3w27|3w27]], [[3w29|3w29]], [[3w2b|3w2b]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene>, <scene name='pdbligand=XYS:XYLOPYRANOSE'>XYS</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tsac_1459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1094508 Thermoanaerobacterium saccharolyticum JW/SL-YS485])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w28 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w28 OCA], [https://pdbe.org/3w28 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w28 RCSB], [https://www.ebi.ac.uk/pdbsum/3w28 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w28 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Endo-1,4-beta-xylanase Endo-1,4-beta-xylanase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.8 3.2.1.8] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3w28 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w28 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3w28 RCSB], [http://www.ebi.ac.uk/pdbsum/3w28 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/I3VVC1_THESW I3VVC1_THESW]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3w28" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Endo-1,4-beta-xylanase]]
+
[[Category: Large Structures]]
-
[[Category: Thermoanaerobacterium saccharolyticum jw/sl-ys485]]
+
[[Category: Thermoanaerobacterium saccharolyticum JW/SL-YS485]]
-
[[Category: Gao, J]]
+
[[Category: Gao J]]
-
[[Category: Guo, R T]]
+
[[Category: Guo R-T]]
-
[[Category: Han, X]]
+
[[Category: Han X]]
-
[[Category: Huang, C H]]
+
[[Category: Huang C-H]]
-
[[Category: Ko, T P]]
+
[[Category: Ko T-P]]
-
[[Category: Shang, N]]
+
[[Category: Shang N]]
-
[[Category: Shao, W]]
+
[[Category: Shao W]]
-
[[Category: Wiegel, J]]
+
[[Category: Wiegel J]]
-
[[Category: Zhu, Z]]
+
[[Category: Zhu Z]]
-
[[Category: Glycoside hydrolase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Thermophilic]]
+
-
[[Category: Xylanase]]
+
-
[[Category: Xylotriose]]
+

Current revision

The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylotriose

PDB ID 3w28

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3w28"
Personal tools