This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3wuh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:29, 8 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3wuh' size='340' side='right'caption='[[3wuh]], [[Resolution|resolution]] 2.94&Aring;' scene=''>
<StructureSection load='3wuh' size='340' side='right'caption='[[3wuh]], [[Resolution|resolution]] 2.94&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3wuh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WUH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WUH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3wuh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WUH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WUH FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.937&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">QRI7, YDL104C, D2366 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wuh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wuh OCA], [https://pdbe.org/3wuh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wuh RCSB], [https://www.ebi.ac.uk/pdbsum/3wuh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wuh ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wuh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wuh OCA], [https://pdbe.org/3wuh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wuh RCSB], [https://www.ebi.ac.uk/pdbsum/3wuh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wuh ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/QRI7_YEAST QRI7_YEAST]] Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Involved in mitochondrial genome maintenance.<ref>PMID:21183954</ref> <ref>PMID:21285948</ref>
+
[https://www.uniprot.org/uniprot/QRI7_YEAST QRI7_YEAST] Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Involved in mitochondrial genome maintenance.<ref>PMID:21183954</ref> <ref>PMID:21285948</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Baker's yeast]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Ishii, R]]
+
[[Category: Saccharomyces cerevisiae S288C]]
-
[[Category: Ishitani, R]]
+
[[Category: Ishii R]]
-
[[Category: Kobayashi, K]]
+
[[Category: Ishitani R]]
-
[[Category: Nureki, O]]
+
[[Category: Kobayashi K]]
-
[[Category: Tominaga, T]]
+
[[Category: Nureki O]]
-
[[Category: Metal binding protein]]
+
[[Category: Tominaga T]]
-
[[Category: T6a synthesis]]
+

Current revision

Qri7 and AMP complex

PDB ID 3wuh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools