This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4nfe

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:47, 8 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Human kallikrein-related peptidase 2 in complex with benzamidine==
==Human kallikrein-related peptidase 2 in complex with benzamidine==
-
<StructureSection load='4nfe' size='340' side='right' caption='[[4nfe]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='4nfe' size='340' side='right'caption='[[4nfe]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4nfe]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NFE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NFE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4nfe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NFE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NFE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4nff|4nff]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Tissue_kallikrein Tissue kallikrein], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.35 3.4.21.35] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nfe OCA], [https://pdbe.org/4nfe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nfe RCSB], [https://www.ebi.ac.uk/pdbsum/4nfe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nfe ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4nfe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nfe OCA], [http://pdbe.org/4nfe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4nfe RCSB], [http://www.ebi.ac.uk/pdbsum/4nfe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4nfe ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/KLK2_HUMAN KLK2_HUMAN]] Glandular kallikreins cleave Met-Lys and Arg-Ser bonds in kininogen to release Lys-bradykinin.
+
[https://www.uniprot.org/uniprot/KLK2_HUMAN KLK2_HUMAN] Glandular kallikreins cleave Met-Lys and Arg-Ser bonds in kininogen to release Lys-bradykinin.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 21:
==See Also==
==See Also==
-
*[[Kallikrein|Kallikrein]]
+
*[[Kallikrein 3D structures|Kallikrein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Tissue kallikrein]]
+
[[Category: Homo sapiens]]
-
[[Category: Brandstetter, H]]
+
[[Category: Large Structures]]
-
[[Category: Goettig, P]]
+
[[Category: Brandstetter H]]
-
[[Category: Magdolen, V]]
+
[[Category: Goettig P]]
-
[[Category: Skala, W]]
+
[[Category: Magdolen V]]
-
[[Category: Chymotrypsin-like protease]]
+
[[Category: Skala W]]
-
[[Category: Extracellular]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Zinc binding]]
+

Current revision

Human kallikrein-related peptidase 2 in complex with benzamidine

PDB ID 4nfe

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools