This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ntd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:50, 8 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of HlmI==
==Crystal structure of HlmI==
-
<StructureSection load='4ntd' size='340' side='right' caption='[[4ntd]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+
<StructureSection load='4ntd' size='340' side='right'caption='[[4ntd]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ntd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Strc2 Strc2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NTD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NTD FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ntd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_clavuligerus Streptomyces clavuligerus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NTD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NTD FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4fk1|4fk1]], [[4ntc|4ntc]], [[4nte|4nte]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SCLAV_5275 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=443255 STRC2])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ntd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ntd OCA], [https://pdbe.org/4ntd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ntd RCSB], [https://www.ebi.ac.uk/pdbsum/4ntd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ntd ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ntd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ntd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ntd RCSB], [http://www.ebi.ac.uk/pdbsum/4ntd PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/E2PZ87_STRCL E2PZ87_STRCL]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4ntd" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Thioredoxin Reductase|Thioredoxin Reductase]]
+
*[[Thioredoxin reductase 3D structures|Thioredoxin reductase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Strc2]]
+
[[Category: Large Structures]]
-
[[Category: Brakhage, A A]]
+
[[Category: Streptomyces clavuligerus]]
-
[[Category: Groll, M]]
+
[[Category: Brakhage AA]]
-
[[Category: Habel, A]]
+
[[Category: Groll M]]
-
[[Category: Heinekamp, T]]
+
[[Category: Habel A]]
-
[[Category: Hertweck, C]]
+
[[Category: Heinekamp T]]
-
[[Category: Huber, E M]]
+
[[Category: Hertweck C]]
-
[[Category: Scharf, D H]]
+
[[Category: Huber EM]]
-
[[Category: Disulfide bond]]
+
[[Category: Scharf DH]]
-
[[Category: Holomycin]]
+
-
[[Category: Natural sulfur product]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Crystal structure of HlmI

PDB ID 4ntd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools