4nyo

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(New page: '''Unreleased structure''' The entry 4nyo is ON HOLD Authors: Bagautdinov, B., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI) Description: THE 1.8 ANGSTROM CRYST...)
Current revision (14:51, 8 November 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 4nyo is ON HOLD
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==The 1.8 Angstrom Crystal Structure of the Periplasmic Divalent Cation Tolerance Protein Cuta from Pyrococcus Horikoshii OT3==
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<StructureSection load='4nyo' size='340' side='right'caption='[[4nyo]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4nyo]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4lu7 4lu7] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1v99 1v99]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NYO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NYO FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nyo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nyo OCA], [https://pdbe.org/4nyo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nyo RCSB], [https://www.ebi.ac.uk/pdbsum/4nyo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nyo ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CUTA_PYRHO CUTA_PYRHO] Involved in resistance toward heavy metals.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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CutA1 (copper tolerance A1) is a widespread cytoplasmic protein found in archaea, bacteria, plants and animals, including humans. In Escherichia coli it is implicated in divalent metal tolerance, while the mammalian CutA1 homologue has been proposed to mediate brain enzyme acetylcholinesterase activity and copper homeostasis. The X-ray structures of CutA1 from the thermophilic bacterium Thermus thermophilus (TtCutA1) with and without bound Na(+) at 1.7 and 1.9 A resolution, respectively, and from the hyperthermophilic archaeon Pyrococcus horikoshii (PhCutA1) in complex with Na(+) at 1.8 A resolution have been determined. Both are short and rigid proteins of about 12 kDa that form intertwined compact trimers in the crystal and solution. The main difference in the structures is a wide-type beta-bulge on top of the TtCutA1 trimer. It affords a mechanism for lodging a single-residue insertion in the middle of beta2 while preserving the interprotomer main-chain hydrogen-bonding network. The liganded forms of the proteins provide new structural information about the metal-binding sites and CutA1 assembly. The Na(+)-TtCutA1 structure unveils a dodecameric assembly with metal ions in the trimer-trimer interfaces and the lateral clefts of the trimer. For Na(+)-PhCutA1, the metal ion associated with six waters in an octahedral geometry. The structures suggest that CutA1 may contribute to regulating intracellular metal homeostasis through various binding modes.
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Authors: Bagautdinov, B., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
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The structures of the CutA1 proteins from Thermus thermophilus and Pyrococcus horikoshii: characterization of metal-binding sites and metal-induced assembly.,Bagautdinov B Acta Crystallogr F Struct Biol Commun. 2014 Apr;70(Pt 4):404-13. doi:, 10.1107/S2053230X14003422. Epub 2014 Mar 25. PMID:24699729<ref>PMID:24699729</ref>
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Description: THE 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE PERIPLASMIC DIVALENT CATION TOLERANCE PROTEIN CUTA FROM PYROCOCCUS HORIKOSHII OT3
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4nyo" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[CutA1 3D structures|CutA1 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Pyrococcus horikoshii OT3]]
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[[Category: Bagautdinov B]]
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[[Category: Tahirov TH]]

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The 1.8 Angstrom Crystal Structure of the Periplasmic Divalent Cation Tolerance Protein Cuta from Pyrococcus Horikoshii OT3

PDB ID 4nyo

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