This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4orv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 4orv is ON HOLD Authors: Yamini, S. , Sharma, P. , Yadav, SP., Sinha, M. , Bhushan, A., Kaur, P. , Sharma, S., Singh, T.P. Description: Crystal str...)
Current revision (14:58, 8 November 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 4orv is ON HOLD
+
==Crystal structure of the ternary complex of camel peptidoglycan recognition protein PGRP-S with 7- phenylheptanoic acid and N- acetylglucosamine at 2.50 A resolution==
-
 
+
<StructureSection load='4orv' size='340' side='right'caption='[[4orv]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
Authors: Yamini, S. , Sharma, P. , Yadav, SP., Sinha, M. , Bhushan, A., Kaur, P. , Sharma, S., Singh, T.P.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[4orv]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Camelus_dromedarius Camelus dromedarius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ORV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ORV FirstGlance]. <br>
-
Description: Crystal structure of the ternary complex of camel peptidoglycan recognition protein PGRP-S with 7-phenylheptanoic acid and N-acetylglucosamine at 2.50 A resolution
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene>, <scene name='pdbligand=XXC:7-PHENYLHEPTANOIC+ACID'>XXC</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4orv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4orv OCA], [https://pdbe.org/4orv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4orv RCSB], [https://www.ebi.ac.uk/pdbsum/4orv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4orv ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PGRP1_CAMDR PGRP1_CAMDR] Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. Has bactericidal activity towards Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Binds also to Gram-negative bacteria. Involved in innate immunity. Is microbicidal for Gram-positive and Gram-negative bacteria and yeast. May function in intracellular killing of bacteria (By similarity).
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Camelus dromedarius]]
 +
[[Category: Large Structures]]
 +
[[Category: Bhushan A]]
 +
[[Category: Kaur P]]
 +
[[Category: Sharma P]]
 +
[[Category: Sharma S]]
 +
[[Category: Singh TP]]
 +
[[Category: Sinha M]]
 +
[[Category: Yadav SP]]
 +
[[Category: Yamini S]]

Current revision

Crystal structure of the ternary complex of camel peptidoglycan recognition protein PGRP-S with 7- phenylheptanoic acid and N- acetylglucosamine at 2.50 A resolution

PDB ID 4orv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools