This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4yla
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==Crystal structure of the indole prenyltransferase MpnD complexed with indolactam V and DMSPP== | ==Crystal structure of the indole prenyltransferase MpnD complexed with indolactam V and DMSPP== | ||
| - | <StructureSection load='4yla' size='340' side='right' caption='[[4yla]], [[Resolution|resolution]] 1.40Å' scene=''> | + | <StructureSection load='4yla' size='340' side='right'caption='[[4yla]], [[Resolution|resolution]] 1.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4yla]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YLA OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[4yla]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Marinactinospora_thermotolerans Marinactinospora thermotolerans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YLA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YLA FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DST:DIMETHYLALLYL+S-THIOLODIPHOSPHATE'>DST</scene>, <scene name='pdbligand=ILV:(2S,5S)-5-(HYDROXYMETHYL)-1-METHYL-2-(PROPAN-2-YL)-1,2,4,5,6,8-HEXAHYDRO-3H-[1,4]DIAZONINO[7,6,5-CD]INDOL-3-ONE'>ILV</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DST:DIMETHYLALLYL+S-THIOLODIPHOSPHATE'>DST</scene>, <scene name='pdbligand=ILV:(2S,5S)-5-(HYDROXYMETHYL)-1-METHYL-2-(PROPAN-2-YL)-1,2,4,5,6,8-HEXAHYDRO-3H-[1,4]DIAZONINO[7,6,5-CD]INDOL-3-ONE'>ILV</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4yla FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yla OCA], [https://pdbe.org/4yla PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4yla RCSB], [https://www.ebi.ac.uk/pdbsum/4yla PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4yla ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/I7EIW6_9ACTN I7EIW6_9ACTN] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 21: | Line 23: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Marinactinospora thermotolerans]] |
| - | [[Category: | + | [[Category: Abe I]] |
| - | [[Category: | + | [[Category: Mori T]] |
| - | [[Category: | + | [[Category: Morita H]] |
| - | + | ||
| - | + | ||
Current revision
Crystal structure of the indole prenyltransferase MpnD complexed with indolactam V and DMSPP
| |||||||||||
