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5ml8
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==The crystal structure of PDE6D in complex to inhibitor-4== | ==The crystal structure of PDE6D in complex to inhibitor-4== | ||
| - | <StructureSection load='5ml8' size='340' side='right' caption='[[5ml8]], [[Resolution|resolution]] 2.60Å' scene=''> | + | <StructureSection load='5ml8' size='340' side='right'caption='[[5ml8]], [[Resolution|resolution]] 2.60Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5ml8]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ML8 OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[5ml8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ML8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ML8 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=V98:~{N}4-[(4-CHLOROPHENYL)METHYL]-~{N}4-CYCLOPENTYL-~{N}1-(PHENYLMETHYL)-~{N}1-(PIPERIDIN-4-YLMETHYL)BENZENE-1,4-DISULFONAMIDE'>V98</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=V98:~{N}4-[(4-CHLOROPHENYL)METHYL]-~{N}4-CYCLOPENTYL-~{N}1-(PHENYLMETHYL)-~{N}1-(PIPERIDIN-4-YLMETHYL)BENZENE-1,4-DISULFONAMIDE'>V98</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ml8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ml8 OCA], [https://pdbe.org/5ml8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ml8 RCSB], [https://www.ebi.ac.uk/pdbsum/5ml8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ml8 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/PDE6D_HUMAN PDE6D_HUMAN] Acts as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude and does so by decreasing the nucleotide dissociation rate. Stabilizes Arl3-GTP by decreasing the nucleotide dissociation (By similarity). |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 18: | Line 19: | ||
</div> | </div> | ||
<div class="pdbe-citations 5ml8" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5ml8" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Homo sapiens]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Fansa EK]] |
| - | [[Category: | + | [[Category: Martin-Gago P]] |
| - | [[Category: | + | [[Category: Waldmann H]] |
| - | [[Category: | + | [[Category: Wittinghofer A]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
The crystal structure of PDE6D in complex to inhibitor-4
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