This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5mzz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:55, 8 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of the decarboxylase AibA/AibB in complex with 3-methylglutaconate==
==Crystal structure of the decarboxylase AibA/AibB in complex with 3-methylglutaconate==
-
<StructureSection load='5mzz' size='340' side='right' caption='[[5mzz]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+
<StructureSection load='5mzz' size='340' side='right'caption='[[5mzz]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5mzz]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MZZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MZZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5mzz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Myxococcus_xanthus_DK_1622 Myxococcus xanthus DK 1622]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MZZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MZZ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8EW:3-methylpent-2-enedioic+acid'>8EW</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mzz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mzz OCA], [http://pdbe.org/5mzz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mzz RCSB], [http://www.ebi.ac.uk/pdbsum/5mzz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mzz ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8EW:3-methylpent-2-enedioic+acid'>8EW</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mzz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mzz OCA], [https://pdbe.org/5mzz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mzz RCSB], [https://www.ebi.ac.uk/pdbsum/5mzz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mzz ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q1D4I4_MYXXD Q1D4I4_MYXXD]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Blankenfeldt, W]]
+
[[Category: Large Structures]]
-
[[Category: Bock, T]]
+
[[Category: Myxococcus xanthus DK 1622]]
-
[[Category: Feiler, C]]
+
[[Category: Blankenfeldt W]]
-
[[Category: Hoffmann, J]]
+
[[Category: Bock T]]
-
[[Category: Luxenburger, E]]
+
[[Category: Feiler C]]
-
[[Category: Mueller, R]]
+
[[Category: Hoffmann J]]
-
[[Category: Schuetza, V]]
+
[[Category: Luxenburger E]]
-
[[Category: 3-methylglutaconate]]
+
[[Category: Mueller R]]
-
[[Category: Coa transferase like fold]]
+
[[Category: Schuetza V]]
-
[[Category: Decarboxylase]]
+
-
[[Category: Lyase]]
+

Current revision

Crystal structure of the decarboxylase AibA/AibB in complex with 3-methylglutaconate

PDB ID 5mzz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools