This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Ribosomal protein THX 3D structures

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:25, 9 November 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 7: Line 7:
*THX in small ribosomal subunit
*THX in small ribosomal subunit
-
**[[2zm6]], [[1n36]], [[1j5e]], [[4v7w]], [[4v7x]], [[4v7y]], [[4v7z]], [[3oto]], [[4dr1]], [[1i94]] - TtTHX in 30S ribosomal subunit+16S RRNA - Thermus thermophiles<br />
+
**[[2zm6]], [[1n36]], [[1j5e]], [[4v7w]], [[4v7x]], [[4v7y]], [[4v7z]], [[3oto]], [[4dr1]], [[1i94]], [[4ji0]], [[4ji1]], [[4ji2]], [[4ji3]], [[4ji4]], [[4ji5]], [[4ji6]], [[4ji7]], [[4ji8]], [[4kvb]], [[4lf4]], [[4lf5]], [[4lf6]], [[4lf7]], [[4lf8]], [[4lf9]], [[4lfa]], [[4lfb]], [[4lfc]], [[4nxm]], [[4nxn]], [[4yhh]], [[5wnq]], [[5wnr]], [[5wns]] - TtTHX in 30S ribosomal subunit+16S RRNA - Thermus thermophiles<br />
-
**[[2vqe]], [[2vqf]], [[2uuc]], [[2e5l]], [[2uu9]], [[2uua]], [[2uub]] - TtTHX in 30S ribosomal subunit+16S RRNA+RNA fragment<br />
+
**[[2vqe]], [[2vqf]], [[2uuc]], [[2e5l]], [[2uu9]], [[2uua]], [[2uub]], [[4x62]], [[4x64]], [[4x65]], [[4x66]], [[5wnp]], [[5wnt]], [[5wnu]], [[5wnv]], [[6cao]], [[6cap]], [[6caq]], [[6car]], [[6cas]] - TtTHX in 30S ribosomal subunit+16S RRNA+RNA fragment<br />
**[[4duy]], [[4duz]], [[4dv0]], [[4dv1]], [[4dv2]], [[4dv3]], [[4dv4]], [[4dv5]], [[4dv6]], [[4dv7]] - TtTHX in 30S ribosomal subunit+16S RRNA (mutant)<br />
**[[4duy]], [[4duz]], [[4dv0]], [[4dv1]], [[4dv2]], [[4dv3]], [[4dv4]], [[4dv5]], [[4dv6]], [[4dv7]] - TtTHX in 30S ribosomal subunit+16S RRNA (mutant)<br />
-
**[[4dr4]], [[4b3m]], [[4b3r]], [[4b3s]], [[4b3t]] - TtTHX in 30S ribosomal subunit+16S RRNA + mRNA<br />
+
**[[4dr4]], [[4b3m]], [[4b3r]], [[4b3s]], [[4b3t]], [[6dti]], [[6mkn]] - TtTHX in 30S ribosomal subunit+16S RRNA + mRNA<br />
 +
**[[4ox9]] - TtTHX in 30S ribosomal subunit+16S RRNA + 16S rRNA methyltransferase<br />
*THX in small + large ribosomal subunit
*THX in small + large ribosomal subunit
-
**[[1ml5]] - EcTHX in 30S ribosomal subunit+50S ribosomal subunit+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA - EM
+
**[[1ml5]] - EcTHX in 70S ribosome – Cryo EM<br />
 +
**[[5dfe]] - EcTHX in 70S ribosome <br />
 +
**[[4v5n]], [[5a9z]], [[5aa0]], [[5imq]], [[5imr]], [[5ot7]], [[5uq7]], [[5uq8]], [[5zlu]], [[6gzq]], [[6gzx]], [[6gzz]], [[6nd6]], [[6q95]] - TtTHX in 70S ribosome – Cryo EM<br />
 +
**[[1vy4]], [[1vy5]], [[1vy6]], [[1vy7]], [[4l71]], [[4p6f]], [[4p70]], [[4tua]], [[4tub]], [[4tuc]], [[4tud]], [[4tue]], [[4v5l]], [[4v5m]], [[4v5p]], [[4v5q]], [[4v5r]], [[4v5s]], [[4v7j]], [[4v7k]], [[4v83]], [[4v84]], [4v87]], [[4v8a]], [[4v8b]], [[4v8c]], [[4v8d]], [[4v8e]], [[4v8f]], [[4v8o]], [[4v8q]], [[4v8x]], [[4v95]], [[4v9r]], 4v9s]], [[4w2e]], [[4w2f]], [[4w2g]], [[4w2h]], [[4w2i]], [[4w4g]], [[4wpo]], [[4wq1]], [[4wqf]], [[4wqr]], [[4wqu]], [[4wqy]], [[4wr6]], [[4wra]], [[4wro]], [[4wsd]], [[4wsm]], [[4wt1]], [[4wt8]], [[4wu1]], [[4wzd]], [[4wzo]], [[4xej]], [[4y4o]], [[4y4p]], [[4ypb]], [[4yzv]], [[4z3s]], [[4z8c]], [[4zer]], [[4zsn]], [[5czp]], [[5d8b]], [[5dox]], [[5doy]], [[5e7k]], [[5e81]], [[5el4]], [[5el5]], [[5el6]], [[5el7]], [[5f8k]], 5fdu]], [[5fdv]], [[5hau]], [[5hcp]], [[5hcq]], [[5hcr]], [[5hd1]], [[5ib7]], [[5ib8]], [[5ibb]], [[5j30]], [[5j3c]], [[5j4b]], [[5j4c]], [[5j4d]], [[5j8b]], [[5ndk]], [[5v8i]], [[5vp2]], [[5vpo]][[5w4k]], [[5wis]], [[5wit]], [[6b4v]], [[6boh]], [[6bok]], [[6buw]], [[6bz6]], [[6bz7]], [[6bz8]], [[6c5l]], [[6cae]], [[6cfj]], [[6cfk]], [[6cfl]], [[6czr]], [[6fkr]], [[6gsj]], [[6gsk]], [[6gsl]], [[6n1d]], [[6n9e]], [[6n9f]], [[6nd5]], [[5ndj]], [[6ndk]], [[6nsh]], [[6nta]], [[6nuo]], [[6nwy]], [[6o3m]], [[6o97]], [[6of1]], [[6of6]], [[6oj2]], [[6ope]], [[6ord]], [[6osi]], [[6otr]], [[6oxa]], [[6oxi]], [[6qnq]], [[6qnr]], [[6xhx]], [[7azo]], [[7azs]], [[7rq8]], [[7u2h]], [[7u2i]], [[7u2j]], [[8cvj]], [[8cvl]], [[8cvk]], [[8ekb]], [[8ev6]], [[8ev7]], [[8fc1]], [[8fc2]], [[8fc3]], [[8fc4]], [[8fc5]], [[8fc6]], [[8fom]], [[8fon]], [[8t8b]], [[8t8c]] - TtTHX in 70S ribosome<br />
*THX in small ribosomal subunit+ chain release factor (RF)
*THX in small ribosomal subunit+ chain release factor (RF)
Line 24: Line 28:
**[[4v5j]], [[4v5e]] - TtTHX in 30S ribosomal subunit+chain release factor 2+P-site tRNA+mRNA +16S RRNA<br />
**[[4v5j]], [[4v5e]] - TtTHX in 30S ribosomal subunit+chain release factor 2+P-site tRNA+mRNA +16S RRNA<br />
**[[4v67]] - TtTHX in 30S ribosomal subunit+chain release factor 2+P-site tRNA+E-site tRNA +16S RRNA<br />
**[[4v67]] - TtTHX in 30S ribosomal subunit+chain release factor 2+P-site tRNA+E-site tRNA +16S RRNA<br />
-
**[[4kfh]], [[4kfk]] - TtTHX in 30S ribosomal subunit+16S RRNA+ RF-2 + mRNA+ P-site tRNA fMet<br />
+
**[[4v9n]] - TtTHX in 30S ribosomal subunit+16S RRNA+ RF-2 + mRNA+ P-site tRNA fMet<br />
*THX in small ribosomal subunit+tRNA+mRNA
*THX in small ribosomal subunit+tRNA+mRNA
**[[4v4x]] - TtTHX in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet<br />
**[[4v4x]] - TtTHX in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet<br />
-
**[[4l6k]], [[4l6m]] - TtTHX in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA<br />
+
**[[4v9q]] - TtTHX in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA<br />
**[[4v4y]] - TtTHX in 30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA<br />
**[[4v4y]] - TtTHX in 30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA<br />
-
**[[3zn7]], [[3znd]] - TtTHX in 30S ribosomal subunit+16S RRNA+A-site tRNA Ile agmatidine + E-site tRNA Ile agmatidine + mRNA<br />
+
**[[4v8n]] - TtTHX in 30S ribosomal subunit+16S RRNA+A-site tRNA Ile agmatidine + E-site tRNA Ile agmatidine + mRNA<br />
-
**[[4v4z]] [[3v6u]], [[3v6v]], [[4ej9]], [[4eja]] - TtTHX in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet+mRNA<br />
+
**[[4v4z]] [[4v8j]], [[4v97]] - TtTHX in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet+mRNA<br />
**[[4v4p]] – TtTHX in 30S ribosomal subunit+ tRNA Phe+16S RRNA+THRS mRNA operator<br />
**[[4v4p]] – TtTHX in 30S ribosomal subunit+ tRNA Phe+16S RRNA+THRS mRNA operator<br />
**[[1xnq]], [[1xnr]]- TtTHX in 30S ribosomal subunit+mRNA+tRNA anticodon+16S RRNA<br />
**[[1xnq]], [[1xnr]]- TtTHX in 30S ribosomal subunit+mRNA+tRNA anticodon+16S RRNA<br />
**[[4gkj]], [[4gkk]] - TtTHX in 30S ribosomal subunit +16S RRNA + mRNA + tRNA Met<br />
**[[4gkj]], [[4gkk]] - TtTHX in 30S ribosomal subunit +16S RRNA + mRNA + tRNA Met<br />
-
**[[4jv5]], [[4jya]], [[4k0k]], [[4k0l]] - TtTHX in 30S ribosomal subunit +16S RRNA + mRNA + ASL-tRNA <br />
+
**[[3t1h]] - TtTHX in 30S ribosomal subunit +16S RRNA + mRNA + tRNA Lys<br />
 +
**[[4jv5]], [[4jya]], [[4k0k]], [[4v9i]], [[6mpf]], [[6mpi]] - TtTHX in 30S ribosomal subunit +16S RRNA + mRNA + ASL-tRNA <br />
*THX in small ribosomal subunit+A-site tRNA
*THX in small ribosomal subunit+A-site tRNA
Line 65: Line 70:
**[[1jgo]], [[1jgp]], [[1jgq]], [[4v42]] - TtTHX in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+tRNA Phe+mRNA +16S RRNA<br />
**[[1jgo]], [[1jgp]], [[1jgq]], [[4v42]] - TtTHX in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+tRNA Phe+mRNA +16S RRNA<br />
-
**[[4k0p]] - TtTHX in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA +mRNA +16S RRNA<br />
+
**[[4v9i]] - TtTHX in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA +mRNA +16S RRNA<br />
*THX in small ribosomal subunit + antibiotics
*THX in small ribosomal subunit + antibiotics
-
**[[1i95]], [[1i97]], [[2hhh]], [[1fjg]], [[4aqy]], [[4dr5]], [[4dr6]], [[4dr7]], [[4khp]], [[6mpi]], [[6mpf]] - TtTHX in 30S ribosomal subunit+16S RRNA+mRNA fragment+ antibiotic<br />
+
**[[5iwa]] - TtTHX in 30S ribosomal subunit+16S RRNA + peptide antibiotic<br />
 +
**[[1fjg]], [[1hnw]], [[1hnx]], [[1hnz]], [[1i95]], [[1i97]], [[2hhh]], [[3t1y]], [[4aqy]], [[4dr2]], [[4dr3]], [[4dr5]], [[4dr6]], [[4dr7]], [[4khp]], [[6mpi]], [[6mpf]] - TtTHX in 30S ribosomal subunit+16S RRNA+mRNA fragment+ antibiotic<br />
 +
**[[5br8]] - TtTHX in 30S ribosomal subunit+16S RRNA+paromomycin<br />
**[[4v51]] - TtTHX in 30S ribosomal subunit+16S RRNA+paromomycin+P-site tRNA fMet+E-site tRNA Phe+mRNA<br />
**[[4v51]] - TtTHX in 30S ribosomal subunit+16S RRNA+paromomycin+P-site tRNA fMet+E-site tRNA Phe+mRNA<br />
**[[4v5c]], [[4v5d]] - TtTHX in 30S ribosomal subunit+P-site tRNA+E-site tRNA+mRNA +16S RRNA+tRNA Phe+paromomycin<br />
**[[4v5c]], [[4v5d]] - TtTHX in 30S ribosomal subunit+P-site tRNA+E-site tRNA+mRNA +16S RRNA+tRNA Phe+paromomycin<br />
** [[4v7l]], [[4v7m]] - TtTHX in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA+ antibiotics<br />
** [[4v7l]], [[4v7m]] - TtTHX in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA+ antibiotics<br />
-
**[[4g5k]], [[4g5m]], [[4g5t]], [[4g5v]] - TtTHX in 30S ribosomal subunit+16S RRNA + tRNA fMet + mRNA + antibiotics<br />
+
**[[4v9a]], [[4v9b]] - TtTHX in 30S ribosomal subunit+16S RRNA + tRNA fMet + mRNA + antibiotics<br />
-
**[[6mkn]] - TtTHX in 30S ribosomal subunit+16S RRNA + tRNA + mRNA + antibiotics<br />
+
**[[6mkn]], [[7dug]], [[7duh]], [[7dui]], [[7duj]], [[7duk]], [[7dul]] - TtTHX in 30S ribosomal subunit+16S RRNA + tRNA + mRNA + antibiotics<br />
**[[6dti]] - TtTHX in 30S ribosomal subunit+16S RRNA + tRNA Arg + mRNA + antibiotics<br />
**[[6dti]] - TtTHX in 30S ribosomal subunit+16S RRNA + tRNA Arg + mRNA + antibiotics<br />
**[[4v53]] - EcTHX in 30S ribosomal subunit+16S RRNA+kasugamyin
**[[4v53]] - EcTHX in 30S ribosomal subunit+16S RRNA+kasugamyin
Line 88: Line 95:
**[[4v68]] - TtTHX in 30S ribosomal subunit+A-site tRNA+P-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU-A<br />
**[[4v68]] - TtTHX in 30S ribosomal subunit+A-site tRNA+P-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU-A<br />
**[[4v6a]] - TtTHX in 30S ribosomal subunit+tRNA-Met+mRNA +16S RRNA+elongation factor P<br />
**[[4v6a]] - TtTHX in 30S ribosomal subunit+tRNA-Met+mRNA +16S RRNA+elongation factor P<br />
-
**[[4b8f]], [[4b8h]] - TtTHX in 30S ribosomal subunit+RNA+mRNA +16S RRNA+EF-G<br />
+
**[[4v8u]] - TtTHX in 30S ribosomal subunit+RNA+mRNA +16S RRNA+EF-G<br />
-
**[[4btc]] - TtTHX in 30S ribosomal subunit+RNA +16S RRNA+EF-G<br />
+
**[[4v90]] - TtTHX in 30S ribosomal subunit+RNA +16S RRNA+EF-G<br />
-
**[[4juw]] - TtTHX in 30S ribosomal subunit+ tRNA Phe +16S RRNA + mRNA +EF-G<br />
+
**[[4v9h]] - TtTHX in 30S ribosomal subunit+ tRNA Phe +16S RRNA + mRNA +EF-G<br />
*THX in small ribosomal subunit + translation initiation factor
*THX in small ribosomal subunit + translation initiation factor
-
**[[1i96]] - TtTHX in 30S ribosomal subunit+IF3+16S RRNA
+
**[[1i96]] - TtTHX in 30S ribosomal subunit+IF3+16S RRNA<br />
-
 
+
**[[1hr0]] - TtTHX in 30S ribosomal subunit+IF+16S RRNA<br />
 +
**[[5lmn]], [[5lmo]], [[5lmp]] - TtTHX in 30S ribosomal subunit + mRNA+ IF1 + IF3 +16S RRNA – Cryo EM<br />
 +
**[[5lmu]] - TtTHX in 30S ribosomal subunit + mRNA + IF3 +16S RRNA + tRNA – Cryo EM<br />
 +
**[[5lmq]], [[5lmr]], [[5lms]], [[5lmt]] - TtTHX in 30S ribosomal subunit + mRNA+ IF1 + IF3 +16S RRNA + tRNA – Cryo EM<br />
 +
**[[5lmv]] - TtTHX in 30S ribosomal subunit + mRNA+ IF1 + IF2 + IF3 +16S RRNA + tRNA – Cryo EM<br />
**[[4v5k]] - TtTHX in 30S ribosomal subunit+tRNA Phe+mRNA+colicin E3+16S RRNA<br />
**[[4v5k]] - TtTHX in 30S ribosomal subunit+tRNA Phe+mRNA+colicin E3+16S RRNA<br />
**[[4v8g]], [[4v8h]] – TtTHX in 30S ribosomal subunit +16S RRNA + modulation factor<br />
**[[4v8g]], [[4v8h]] – TtTHX in 30S ribosomal subunit +16S RRNA + modulation factor<br />
-
**[[3v2c]], [[3v2e]] – TtTHX in 30S ribosomal subunit +16S RRNA + ribosome-associated inhibitor<br />
+
**[[4v8i]] – TtTHX in 30S ribosomal subunit +16S RRNA + ribosome-associated inhibitor<br />
**[[6ny6]] - TtTHX in 30S ribosomal subunit +16S RRNA + toxin YOEB<br />
**[[6ny6]] - TtTHX in 30S ribosomal subunit +16S RRNA + toxin YOEB<br />
 +
 +
*THX in small ribosomal subunit + various proteins
 +
 +
**[[4v7j]], [[4v7k]] - TtTHX in 30S ribosomal subunit+toxin RelE+16S RRNA<br />
 +
**[[4v5k]] - TtTHX in 30S ribosomal subunit+tRNA Phe+mRNA+colicin E3+16S RRNA<br />
 +
**[[4v95]] – TtTHX in 30S ribosomal subunit +16S RRNA+mRNA+P-site tRNA fMet +THX + YAEJ<br />
 +
**[[7v2l]], [[7v2m]], [[7v2n]], [[7v2o]], [[7v2p]], [[7v2q]] - TtTHX in 30S ribosome + KsgA – Cryo EM<br />
 +
**[[4yy3]] - TtTHX in 30S ribosome + HigB<br />
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

3D Structures of Ribosomal protein THX

Updated on 09-November-2023

Proteopedia Page Contributors and Editors (what is this?)

Joel L. Sussman, Michal Harel

Personal tools