This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Ryanodine receptor 3D structures

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: == 3D Structures of ryanodine receptor == Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *Ryanodine receptor 1 **...)
Current revision (07:55, 14 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 4: Line 4:
{{#tree:id=OrganizedByTopic|openlevels=0|
{{#tree:id=OrganizedByTopic|openlevels=0|
-
*Ryanodine receptor 1
+
*Ryanodine receptor 1; Domains – b-trefoil 1-210; SPRY1 650-844; SPRY2 1070-1246; phosphorylation 2733-3050
-
**[[3hsm]], [[3ila]] – rRyR1 N terminal b-trefoil domain residues 1-210 – rabbit <br />
+
**[[6w1n]] – pRyR1 + FKBP1B – pig - Cryo EM <br />
 +
**[[6x34]] – pRyR1 (mutant) + FKBP1B - Cryo EM <br />
 +
**[[8sen]], [[8seu]] – rRyR1 - rabbit - Cryo EM <br />
 +
**[[8drp]] – rRyR1 + caffeine + ATP - Cryo EM <br />
 +
**[[8sep]], [[8sew]] – rRyR1 + ADP - Cryo EM <br />
 +
**[[8seo]], [[8sev]] – rRyR1 + ATP-g-S - Cryo EM <br />
 +
**[[8seq]], [[8sex]] – rRyR1 + AMP - Cryo EM <br />
 +
**[[8set]], [[8sf0]] – rRyR1 + cAMP - Cryo EM <br />
 +
**[[8ses]], [[8sez]] – rRyR1 + adenine - Cryo EM <br />
 +
**[[8ser]], [[8sey]] – rRyR1 + adenosine - Cryo EM <br />
 +
**[[8dtb]], [[8duj]], [[8dve]] – rRyR1 + imperacalcin - Cryo EM <br />
 +
**[[3hsm]], [[3ila]] – rRyR1 b-trefoil domain <br />
**[[2xoa]] – rRyR1 N terminal residues 1-559<br />
**[[2xoa]] – rRyR1 N terminal residues 1-559<br />
**[[4i0y]], [[4i1e]], [[4i2s]], [[4i37]], [[4i3n]], [[4i6i]], [[4i8m]] – rRyR1 N terminal residues 1-559 (mutant)<br />
**[[4i0y]], [[4i1e]], [[4i2s]], [[4i37]], [[4i3n]], [[4i6i]], [[4i8m]] – rRyR1 N terminal residues 1-559 (mutant)<br />
**[[4i7i]] – rRyR1 N terminal residues 1-536 (mutant)<br />
**[[4i7i]] – rRyR1 N terminal residues 1-536 (mutant)<br />
**[[4i96]] – rRyR1 N terminal residues 217-536 <br />
**[[4i96]] – rRyR1 N terminal residues 217-536 <br />
-
**[[5c33]] – rRyR1 SPRY1 domain residues 650-844 <br />
+
**[[5c33]] – rRyR1 SPRY1 domain <br />
**[[5c30]] – rRyR1 repeat 12 domain residues 857-1054 <br />
**[[5c30]] – rRyR1 repeat 12 domain residues 857-1054 <br />
-
**[[4p9j]] – rRyR1 SPRY2 domain residues 1070-1246 <br />
+
**[[4p9j]] – rRyR1 SPRY2 domain<br />
-
**[[3rqr]] – rRyR1 phosphorylation domain residues 2733-2940 + tetrapeptide<br />
+
**[[3rqr]] – rRyR1 phosphorylation domain + tetrapeptide<br />
-
**[[4ert]] – rRyR1 phosphorylation domain residues 2733-2940 <br />
+
**[[4ert]] – rRyR1 phosphorylation domain <br />
-
**[[4esu]], [[4ett]], [[4etu]] – rRyR1 phosphorylation domain residues 2733-2940 (mutant)<br />
+
**[[4esu]], [[4ett]], [[4etu]] – rRyR1 phosphorylation domain (mutant)<br />
-
**[[4uwa]], [[4uwe]], [[5j8v]] – rRyR1 – Cryo EM <br />
+
**[[4uwa]], [[4uwe]], [[6fg3]], [[6foo]] – rRyR1 – Cryo EM <br />
-
**[[5tb0]], [[5taw]], [[5tax]], [[5tay]], [[5taz]], [[5t15]], [[5t9m]], [[5t9n]], [[5t9r]], [[5t9s]], [[5t9v]], [[5tb0]], [[5tb1]], [[5tb2]], [[5tb3]], [[5tb4]], [[5gky]], [[5gkz]], [[5gl0]], [[5gl1]] – rRyR1 + FKBP1B – Cryo EM <br />
+
**[[5tb0]], [[6pv6]], [[6wot]], [[6wou]], [[6wov]], [[7cf9]], [[7jmf]], [[7jmg]], [[7jmh]], [[7jmi]], [[7jmj]], [[7m6a]], [[7m6l]] – rRyR1 + FKBP1B – Cryo EM <br />
-
**[[5ta3]], [[5tal]], [[5tam]], [[5tan]], [[5tap]], [[5taq]], [[5tas]], [[5tat]], [[5tau]], [[5tav]] – rRyR1 + FKBP1B + caffeine + ATP – Cryo EM <br />
+
**[[6m2w]] – rRyR1 + FKBP1B + calmodulin + caffeine + ATP – Cryo EM <br />
-
**[[6fg3]] – rRyR1 + ryanodine + ATP – Cryo EM <br />
+
-
**[[6foo]] – rRyR1 + ATP – Cryo EM <br />
+
**[[3j8h]] – rRyR1 + FKBP12 – Cryo EM <br />
**[[3j8h]] – rRyR1 + FKBP12 – Cryo EM <br />
-
**[[5y9v]] – dmRyR1 N terminal - diamondback moth <br />
+
**[[7k0s]], [[7k0t]], [[7tdg]], [[7thj]], [[7tdi]], [[7tdj]], [[7tdk]] – rRyR1 + AMPPCP – Cryo EM <br />
-
**[[6j6o]], [[6j6p]] – dmRyR1 phosphorylation domain residues 2836-3050 (mutant) <br />
+
**[[6lqk]] – RyR1 N terminal residues 1-204 - bee<br />
 +
**[[6j6o]], [[6j6p]] – dmRyR1 phosphorylation domain (mutant) – diamondback moth<br />
 +
**[[6j6l]], [[6lt9]] – dmRyR1 SPRY1 domain (mutant)<br />
 +
**[[6kim]] – dmRyR1 SPRY2 domain (mutant)<br />
*Ryanodine receptor 2 (Cardiac Ca+2 release channel); domains - N terminal 1-547; SPRY2 1080-1253; phosphorylation 2699-2904
*Ryanodine receptor 2 (Cardiac Ca+2 release channel); domains - N terminal 1-547; SPRY2 1080-1253; phosphorylation 2699-2904
-
**[[3im5]] – mRyR2 N terminal – mouse <br />
+
**[[4jkq]] – hRyR2 N terminal residues 1-606 - human <br />
-
**[[3im6]], [[3im7]], [[4kei]], [[4kej]], [[4kek]] – mRyR2 N terminal (mutant) <br />
+
**[[7kl5]] – hRyR2 + calmodulin <br />
-
**[[2mc2]] – mRyR2 N terminal - NMR <br />
+
**[[6jg3]] – pRyR2 – Cryo EM <br />
-
**[[3qr5]] – mRyR2 N terminal <br />
+
**[[6jgz]], [[6ji0]], [[6jh6]], [[6jhn]], [[6jrr]] – pRyR2 + FKBP1B - Cryo EM <br />
 +
**[[3im5]] – mRyR2 b-trefoil domain – mouse <br />
 +
**[[3im6]], [[3im7]], [[4kei]], [[4kej]], [[4kek]] – mRyR2 b-trefoil domain (mutant) <br />
 +
**[[2mc2]] – mRyR2 b-trefoil domain - NMR <br />
 +
**[[3qr5]] – mRyR2 N terminal residues 1-56, 92-217 <br />
**[[4etv]] – mRyR2 phosphorylation domain (mutant) <br />
**[[4etv]] – mRyR2 phosphorylation domain (mutant) <br />
-
**[[4l4h]] – mRyR2 N terminal <br />
+
**[[6mm6]], [[6mm7]], [[6mm8]] – mRyR2 phosphorylation domain (mutant) + PKA C-a<br />
-
**[[4l4i]] – mRyR2 N terminal (mutant) <br />
+
**[[4l4h]] – mRyR2 N terminal residues 1-547 <br />
 +
**[[4l4i]] – mRyR2 N terminal residues 1-547 (mutant) <br />
 +
**[[6j6l]] – mRyR2 SPRY1 domain (mutant)<br />
**[[4p9i]] – mRyR2 SPRY2 domain <br />
**[[4p9i]] – mRyR2 SPRY2 domain <br />
-
**[[4p9l]], [[5vsn]] – mRyR2 SPRY2 domain (mutant)<br />
+
**[[4p9l]] – mRyR2 SPRY2 domain (mutant)<br />
-
**[[4jkq]] – hRyR2 N terminal - human <br />
+
**[[6xwv]] – RyR2 + calmodulin ''Drosophila melanogaster''<br />
-
**[[5go9]], [[5goa]] – RyR2 – pig - Cryo EM <br />
+
-
**[[5l1d]] – rRyR2 + FKBP12 Cryo EM <br />
+
*Ryanodine receptor 3
*Ryanodine receptor 3
 +
**[[6uha]], [[6uhb]], [[6uhe]] – hRyR3 residues 848-1055 <br />
 +
**[[6uhh]] – hRyR3 residues 848-1055 + ATP<br />
**[[4erv]] – hRyR3 residues 2597-2800 <br />
**[[4erv]] – hRyR3 residues 2597-2800 <br />
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

3D Structures of ryanodine receptor

Updated on 14-November-2023

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

Personal tools