This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4i30

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:15, 15 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of Canavalia maritima seeds lectin (ConM) co-crystalized with gamma-aminobutyric acid (GABA) and soaked with adenine==
==Crystal structure of Canavalia maritima seeds lectin (ConM) co-crystalized with gamma-aminobutyric acid (GABA) and soaked with adenine==
-
<StructureSection load='4i30' size='340' side='right' caption='[[4i30]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
+
<StructureSection load='4i30' size='340' side='right'caption='[[4i30]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4i30]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Canavalia_lineata Canavalia lineata]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3s0s 3s0s]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4I30 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4I30 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4i30]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Canavalia_lineata Canavalia lineata]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3s0s 3s0s]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4I30 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4I30 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ABU:GAMMA-AMINO-BUTANOIC+ACID'>ABU</scene>, <scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4i30 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4i30 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4i30 RCSB], [http://www.ebi.ac.uk/pdbsum/4i30 PDBsum]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ABU:GAMMA-AMINO-BUTANOIC+ACID'>ABU</scene>, <scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4i30 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4i30 OCA], [https://pdbe.org/4i30 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4i30 RCSB], [https://www.ebi.ac.uk/pdbsum/4i30 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4i30 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CONA_CANLI CONA_CANLI]] Glucose/D-mannose specific lectin.
+
[https://www.uniprot.org/uniprot/CONA_CANLI CONA_CANLI] Glucose/D-mannose specific lectin.
==See Also==
==See Also==
-
*[[Concanavalin A|Concanavalin A]]
+
*[[Concanavalin 3D structures|Concanavalin 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Canavalia lineata]]
[[Category: Canavalia lineata]]
-
[[Category: Cavada, B S]]
+
[[Category: Large Structures]]
-
[[Category: Delatorre, P]]
+
[[Category: Cavada BS]]
-
[[Category: Gadelha, C A.A]]
+
[[Category: Delatorre P]]
-
[[Category: Nobrega, R B]]
+
[[Category: Gadelha CAA]]
-
[[Category: Rocha, B A.M]]
+
[[Category: Nobrega RB]]
-
[[Category: Santi-Gadelha, T]]
+
[[Category: Rocha BAM]]
-
[[Category: Silva-Filho, J C]]
+
[[Category: Santi-Gadelha T]]
-
[[Category: Teixeira, C S]]
+
[[Category: Silva-Filho JC]]
-
[[Category: Beta-sandwich]]
+
[[Category: Teixeira CS]]
-
[[Category: Jelly-roll]]
+
-
[[Category: Sugar binding protein]]
+
-
[[Category: Sugar-binding protein]]
+

Current revision

Crystal structure of Canavalia maritima seeds lectin (ConM) co-crystalized with gamma-aminobutyric acid (GABA) and soaked with adenine

PDB ID 4i30

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools