This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5nnk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:12, 15 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==The structure of LL-37 crystallized in the presence LDAO==
==The structure of LL-37 crystallized in the presence LDAO==
-
<StructureSection load='5nnk' size='340' side='right' caption='[[5nnk]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='5nnk' size='340' side='right'caption='[[5nnk]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5nnk]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NNK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NNK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5nnk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NNK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NNK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.798&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nnk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nnk OCA], [http://pdbe.org/5nnk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nnk RCSB], [http://www.ebi.ac.uk/pdbsum/5nnk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nnk ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5nnk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nnk OCA], [https://pdbe.org/5nnk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5nnk RCSB], [https://www.ebi.ac.uk/pdbsum/5nnk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5nnk ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CAMP_HUMAN CAMP_HUMAN]] Binds to bacterial lipopolysaccharides (LPS), has antibacterial activity.<ref>PMID:16637646</ref> <ref>PMID:18818205</ref>
+
[https://www.uniprot.org/uniprot/CAMP_HUMAN CAMP_HUMAN] Binds to bacterial lipopolysaccharides (LPS), has antibacterial activity.<ref>PMID:16637646</ref> <ref>PMID:18818205</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Sancho-Vaello, E]]
+
[[Category: Homo sapiens]]
-
[[Category: Zeth, K]]
+
[[Category: Large Structures]]
-
[[Category: Amp]]
+
[[Category: Sancho-Vaello E]]
-
[[Category: Antimicrobial peptide]]
+
[[Category: Zeth K]]
-
[[Category: Antimicrobial protein]]
+
-
[[Category: Ldao]]
+
-
[[Category: Ll-37]]
+
-
[[Category: Peptide-detergent complex]]
+

Current revision

The structure of LL-37 crystallized in the presence LDAO

PDB ID 5nnk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools