This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5yjf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:31, 22 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Co-crystal structure of Human Nicotinamide N-methyltransferase (NNMT) with small molecule analog of Nicotinamide==
==Co-crystal structure of Human Nicotinamide N-methyltransferase (NNMT) with small molecule analog of Nicotinamide==
-
<StructureSection load='5yjf' size='340' side='right' caption='[[5yjf]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
+
<StructureSection load='5yjf' size='340' side='right'caption='[[5yjf]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5yjf]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YJF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5yjf]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YJF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8WO:6-methoxy-1-methyl-2H-pyridine-3-carboxamide'>8WO</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.49&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nicotinamide_N-methyltransferase Nicotinamide N-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.1 2.1.1.1] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8WO:6-methoxy-1-methyl-2H-pyridine-3-carboxamide'>8WO</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5yjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yjf OCA], [http://pdbe.org/5yjf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5yjf RCSB], [http://www.ebi.ac.uk/pdbsum/5yjf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5yjf ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5yjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yjf OCA], [https://pdbe.org/5yjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5yjf RCSB], [https://www.ebi.ac.uk/pdbsum/5yjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5yjf ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/NNMT_HUMAN NNMT_HUMAN]] Catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions. This activity is important for biotransformation of many drugs and xenobiotic compounds.
+
[https://www.uniprot.org/uniprot/NNMT_HUMAN NNMT_HUMAN] Catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions. This activity is important for biotransformation of many drugs and xenobiotic compounds.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Nicotinamide N-methyltransferase]]
+
[[Category: Homo sapiens]]
-
[[Category: Birudukota, S]]
+
[[Category: Large Structures]]
-
[[Category: Dhakshinamoorthy, S]]
+
[[Category: Birudukota S]]
-
[[Category: Gosu, R]]
+
[[Category: Dhakshinamoorthy S]]
-
[[Category: Hallur, M S]]
+
[[Category: Gosu R]]
-
[[Category: Kandan, S]]
+
[[Category: Hallur MS]]
-
[[Category: Kannt, A]]
+
[[Category: Kandan S]]
-
[[Category: Parveen, R]]
+
[[Category: Kannt A]]
-
[[Category: Rajagopal, S]]
+
[[Category: Parveen R]]
-
[[Category: Ruf, S]]
+
[[Category: Rajagopal S]]
-
[[Category: Swaminathan, S]]
+
[[Category: Ruf S]]
-
[[Category: Thakur, M K]]
+
[[Category: Swaminathan S]]
-
[[Category: Mna]]
+
[[Category: Thakur MK]]
-
[[Category: Na]]
+
-
[[Category: Nnmt]]
+
-
[[Category: T2d]]
+
-
[[Category: Transferase]]
+

Current revision

Co-crystal structure of Human Nicotinamide N-methyltransferase (NNMT) with small molecule analog of Nicotinamide

PDB ID 5yjf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools