This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5zf0
From Proteopedia
(Difference between revisions)
m (Protected "5zf0" [edit=sysop:move=sysop]) |
|||
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==X-ray Structure of the Electron Transfer Complex between Ferredoxin and Photosystem I== | |
| + | <StructureSection load='5zf0' size='340' side='right'caption='[[5zf0]], [[Resolution|resolution]] 4.20Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5zf0]] is a 60 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermosynechococcus_vestitus Thermosynechococcus vestitus] and [https://en.wikipedia.org/wiki/Thermosynechococcus_vestitus_BP-1 Thermosynechococcus vestitus BP-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZF0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ZF0 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 4.2Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE'>LMG</scene>, <scene name='pdbligand=PQN:PHYLLOQUINONE'>PQN</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5zf0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zf0 OCA], [https://pdbe.org/5zf0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5zf0 RCSB], [https://www.ebi.ac.uk/pdbsum/5zf0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5zf0 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PSAE_THEVB PSAE_THEVB] Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase. | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Photosystem I (PSI), a large protein complex located in the thylakoid membrane, mediates the final step in light-driven electron transfer to the stromal electron carrier protein ferredoxin (Fd). Here, we report the first structural description of the PSI-Fd complex from Thermosynechococcus elongatus. The trimeric PSI complex binds three Fds in a non-equivalent manner. While each is recognized by a PSI protomer in a similar orientation, the distances between Fds and the PSI redox centres differ. Fd binding thus entails loss of the exact three-fold symmetry of the PSI's soluble subunits, inducing structural perturbations which are transferred to the lumen through PsaF. Affinity chromatography and nuclear magnetic resonance analyses of PSI-Fd complexes support the existence of two different Fd-binding states, with one Fd being more tightly bound than the others. We propose a dynamic structural basis for productive complex formation, which supports fast electron transfer between PSI and Fd. | ||
| - | + | X-ray structure of an asymmetrical trimeric ferredoxin-photosystem I complex.,Kubota-Kawai H, Mutoh R, Shinmura K, Setif P, Nowaczyk MM, Rogner M, Ikegami T, Tanaka H, Kurisu G Nat Plants. 2018 Apr;4(4):218-224. doi: 10.1038/s41477-018-0130-0. Epub 2018 Apr , 2. PMID:29610537<ref>PMID:29610537</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 5zf0" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | |
| - | [[Category: | + | ==See Also== |
| - | [[Category: Kurisu | + | *[[Photosystem I 3D structures|Photosystem I 3D structures]] |
| - | [[Category: | + | == References == |
| - | [[Category: | + | <references/> |
| - | [[Category: Setif | + | __TOC__ |
| - | [[Category: Shinmura | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| + | [[Category: Thermosynechococcus vestitus]] | ||
| + | [[Category: Thermosynechococcus vestitus BP-1]] | ||
| + | [[Category: Ikegami T]] | ||
| + | [[Category: Kubota-Kawai H]] | ||
| + | [[Category: Kurisu G]] | ||
| + | [[Category: Mutoh R]] | ||
| + | [[Category: Nowaczyk M]] | ||
| + | [[Category: Roegner M]] | ||
| + | [[Category: Setif P]] | ||
| + | [[Category: Shinmura K]] | ||
| + | [[Category: Tanaka T]] | ||
Current revision
X-ray Structure of the Electron Transfer Complex between Ferredoxin and Photosystem I
| |||||||||||
