This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6ji3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:09, 22 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6ji3 is ON HOLD until Feb 20 2021
+
==BRD4-BD1 bound with ligand 103==
 +
<StructureSection load='6ji3' size='340' side='right'caption='[[6ji3]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6ji3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JI3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6JI3 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BW6:(3~{R})-4-cyclopropyl-1,3-dimethyl-6-(1~{H}-pyrrol-2-yl)-3~{H}-quinoxalin-2-one'>BW6</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ji3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ji3 OCA], [https://pdbe.org/6ji3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ji3 RCSB], [https://www.ebi.ac.uk/pdbsum/6ji3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ji3 ProSAT]</span></td></tr>
 +
</table>
 +
== Disease ==
 +
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Note=A chromosomal aberration involving BRD4 is found in a rare, aggressive, and lethal carcinoma arising in midline organs of young people. Translocation t(15;19)(q14;p13) with NUT which produces a BRD4-NUT fusion protein.<ref>PMID:12543779</ref> <ref>PMID:11733348</ref>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Plays a role in a process governing chromosomal dynamics during mitosis (By similarity).
-
Authors: Cao, D.Y., Li, Y.L., Du, Z.Y., Li, J., Xiong, B.
+
==See Also==
-
 
+
*[[Bromodomain-containing protein 3D structures|Bromodomain-containing protein 3D structures]]
-
Description: BRD4-BD1 bound with ligand 103
+
== References ==
-
[[Category: Unreleased Structures]]
+
<references/>
-
[[Category: Cao, D.Y]]
+
__TOC__
-
[[Category: Xiong, B]]
+
</StructureSection>
-
[[Category: Du, Z.Y]]
+
[[Category: Homo sapiens]]
-
[[Category: Li, J]]
+
[[Category: Large Structures]]
-
[[Category: Li, Y.L]]
+
[[Category: Cao DY]]
 +
[[Category: Du ZY]]
 +
[[Category: Li J]]
 +
[[Category: Li YL]]
 +
[[Category: Xiong B]]

Current revision

BRD4-BD1 bound with ligand 103

PDB ID 6ji3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools