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6ix4
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==Structure of an epoxide hydrolase from Aspergillus usamii E001 (AuEH2) at 1.51 Angstroms resolution== | |
| + | <StructureSection load='6ix4' size='340' side='right'caption='[[6ix4]], [[Resolution|resolution]] 1.51Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6ix4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_usamii Aspergillus usamii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IX4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6IX4 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.511Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ix4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ix4 OCA], [https://pdbe.org/6ix4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ix4 RCSB], [https://www.ebi.ac.uk/pdbsum/6ix4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ix4 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/T2B4K5_ASPUS T2B4K5_ASPUS] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Only a few known epoxide hydrolases (EHs) displayed activity towards o-nitrostyrene oxide (4a), presumably owing to the large steric hindrance caused by o-nitro substituent. Therefore, excavating EHs with high activity and enantio- and/or regio-selectivity towards racemic (rac-) 4a is essential but challenging. Here, AuEH2 from Aspergillus usamii was expressed in E. coli BL21(DE3). E. coli/Aueh2, an E. coli transformant expressing AuEH2, possessed EH activities of 16.2-184 U/g wet cell towards rac-styrene oxide (1a) and its derivatives (2a-13a), and the largest enantiomeric ratio of 96 towards rac-4a. The regioselectivity coefficients, beta(R) and beta(S), of AuEH2 were determined to be 99.2% and 98.9%, suggesting that it regiopreferentially attacks the C(beta) in the oxirane rings of (R)- and (S)-4a. Then, the nearly perfect kinetic resolution of 20 mM rac-4a in pure water was carried out using 20 mg/mL wet cells of E. coli/Aueh2 at 25 degrees C for 50 min, retaining (S)-4a with over 99% ee(s) and 48.9% yield(s), while producing (R)-o-nitrophenyl-1,2-ethanediol (4b) with 95.3% ee(p) and 49.8% yield(p). To elucidate the molecular mechanism of AuEH2 with high enantiopreference for (R)-4a, its crystal structure was solved by X-ray diffraction and the molecular docking of AuEH2 with (R)- or (S)-4a was simulated. | ||
| - | + | Nearly perfect kinetic resolution of racemic o-nitrostyrene oxide by AuEH2, a microsomal epoxide hydrolase from Aspergillus usamii, with high enantio- and regio-selectivity.,Hu D, Hu BC, Wen Z, Zhang D, Liu YY, Zang J, Wu MC Int J Biol Macromol. 2021 Feb 1;169:1-7. doi: 10.1016/j.ijbiomac.2020.12.074. , Epub 2020 Dec 13. PMID:33316339<ref>PMID:33316339</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: Hou | + | <div class="pdbe-citations 6ix4" style="background-color:#fffaf0;"></div> |
| - | [[Category: Hu | + | |
| - | [[Category: Rao | + | ==See Also== |
| - | [[Category: Wu | + | *[[Epoxide hydrolase 3D structures|Epoxide hydrolase 3D structures]] |
| - | [[Category: | + | == References == |
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Aspergillus usamii]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Hou XD]] | ||
| + | [[Category: Hu BC]] | ||
| + | [[Category: Hu D]] | ||
| + | [[Category: Rao YJ]] | ||
| + | [[Category: Wu L]] | ||
| + | [[Category: Wu MC]] | ||
Current revision
Structure of an epoxide hydrolase from Aspergillus usamii E001 (AuEH2) at 1.51 Angstroms resolution
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Categories: Aspergillus usamii | Large Structures | Hou XD | Hu BC | Hu D | Rao YJ | Wu L | Wu MC
