This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7bxr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:39, 29 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7bxr' size='340' side='right'caption='[[7bxr]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
<StructureSection load='7bxr' size='340' side='right'caption='[[7bxr]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7bxr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_17697_[[alcaligenes_eutrophus]] Atcc 17697 [[alcaligenes eutrophus]]]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BXR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BXR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7bxr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_necator Cupriavidus necator]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BXR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BXR FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=F9X:(2S,3R)-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-3-oxidanyl-pentanoic+acid'>F9X</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">kbl, H16_B0819 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=106590 ATCC 17697 [[Alcaligenes eutrophus]]])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=F9X:(2S,3R)-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-3-oxidanyl-pentanoic+acid'>F9X</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glycine_C-acetyltransferase Glycine C-acetyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.29 2.3.1.29] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bxr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bxr OCA], [https://pdbe.org/7bxr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bxr RCSB], [https://www.ebi.ac.uk/pdbsum/7bxr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bxr ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bxr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bxr OCA], [https://pdbe.org/7bxr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bxr RCSB], [https://www.ebi.ac.uk/pdbsum/7bxr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bxr ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/Q0K313_CUPNH Q0K313_CUPNH]] Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.[HAMAP-Rule:MF_00985]
+
[https://www.uniprot.org/uniprot/Q0K313_CUPNH Q0K313_CUPNH] Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.[HAMAP-Rule:MF_00985]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Glycine C-acetyltransferase]]
 
-
[[Category: Large Structures]]
 
-
[[Category: Hasebe, F]]
 
-
[[Category: Ito, S]]
 
-
[[Category: Miyoshi, N]]
 
-
[[Category: Motoyama, T]]
 
-
[[Category: Nakano, S]]
 
-
[[Category: 2-amino-3-ketobutyrate coa ligase]]
 
[[Category: Cupriavidus necator]]
[[Category: Cupriavidus necator]]
-
[[Category: Ligase]]
+
[[Category: Large Structures]]
-
[[Category: Transferase]]
+
[[Category: Hasebe F]]
 +
[[Category: Ito S]]
 +
[[Category: Miyoshi N]]
 +
[[Category: Motoyama T]]
 +
[[Category: Nakano S]]

Current revision

2-amino-3-ketobutyrate CoA ligase from Cupriavidus necator 3-Hydroxynorvaline binding form

PDB ID 7bxr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools