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7yja
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 7yja is ON HOLD Authors: Li, J.X., Cheng, A.X., Zhang, P. Description: Crystal structure of Stenoloma chusanum chalcone synthase 1 (ScCHS1) complex...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of Stenoloma chusanum chalcone synthase 1 (ScCHS1) complex with CoA and Pinocembrin== | |
| + | <StructureSection load='7yja' size='340' side='right'caption='[[7yja]], [[Resolution|resolution]] 2.17Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[7yja]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Odontosoria_chusana Odontosoria chusana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7YJA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7YJA FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.17Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=KML:pinocembrin'>KML</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7yja FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7yja OCA], [https://pdbe.org/7yja PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7yja RCSB], [https://www.ebi.ac.uk/pdbsum/7yja PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7yja ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The key enzymes involved in the flavonoid biosynthesis pathway have been extensively studied in seed plants, but relatively less in ferns. In this study, two 4-Coumarate: coenzyme A ligases (Sc4CL1 and Sc4CL2) and one novel chalcone synthase (ScCHS1) were functionally characterized by mining the Stenoloma chusanum transcriptome database. Recombinant Sc4CLs were able to esterify various hydroxycinnamic acids to corresponding acyl-coenzyme A (CoA). ScCHS1 could catalyze p-coumaroyl-CoA, cinnamoyl-CoA, caffeoyl-CoA, and feruloyl-CoA to form naringenin, pinocembrin, eriodictyol, and homoeriodictyol, respectively. Moreover, enzymatic kinetics studies revealed that the optimal substrates of ScCHS1 were feruloyl-CoA and caffeoyl-CoA, rather than p-coumaroyl-CoA, which was substantially different from the common CHSs. Crystallographic and site-directed mutagenesis experiments indicated that the amino acid residues, Leu87, Leu97, Met165, and Ile200, located in the substrate-binding pocket near the B-ring of products, could exert a significant impact on the unique catalytic activity of ScCHS1. Furthermore, overexpression of ScCHS1 in tt4 mutants could partially rescue the mutant phenotypes. Finally, ScCHS1 and Sc4CL1 were used to synthesize flavanones and flavones with multi-substituted hydroxyl and methoxyl B-ring in Escherichia coli, which can effectively eliminate the need for the cytochrome P450 hydroxylation/O-methyltransferase from simple phenylpropanoid acids. In summary, the identification of these important Stenoloma enzymes provides a springboard for the future production of various flavonoids in E. coli. This article is protected by copyright. All rights reserved. | ||
| - | + | Molecular and structural characterization of a promiscuous chalcone synthase from the fern species Stenoloma chusanum.,Ni R, Niu M, Fu J, Tan H, Zhu TT, Zhang J, Lou HX, Zhang P, Li JX, Cheng AX J Integr Plant Biol. 2022 Aug 3. doi: 10.1111/jipb.13335. PMID:35920566<ref>PMID:35920566</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: Cheng | + | <div class="pdbe-citations 7yja" style="background-color:#fffaf0;"></div> |
| - | [[Category: Li | + | |
| - | [[Category: Zhang | + | ==See Also== |
| + | *[[Chalcone synthase|Chalcone synthase]] | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Odontosoria chusana]] | ||
| + | [[Category: Cheng AX]] | ||
| + | [[Category: Li JX]] | ||
| + | [[Category: Zhang P]] | ||
Current revision
Crystal structure of Stenoloma chusanum chalcone synthase 1 (ScCHS1) complex with CoA and Pinocembrin
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