This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1gea

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:37, 29 November 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1gea.png|left|200px]]
 
-
{{STRUCTURE_1gea| PDB=1gea | SCENE= }}
+
==RECEPTOR-BOUND CONFORMATION OF PACAP21==
 +
<StructureSection load='1gea' size='340' side='right'caption='[[1gea]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1gea]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GEA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GEA FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LYN:2,6-DIAMINO-HEXANOIC+ACID+AMIDE'>LYN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gea FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gea OCA], [https://pdbe.org/1gea PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gea RCSB], [https://www.ebi.ac.uk/pdbsum/1gea PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gea ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PACA_HUMAN PACA_HUMAN] Binding to its receptor activates G proteins and stimulates adenylate cyclase in pituitary cells.<ref>PMID:11175907</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Many peptide hormones elicit a wide array of physiological effects by binding to G-protein coupled receptors. We have determined the conformation of pituitary adenylate cyclase activating polypeptide, PACAP(1--21)NH(2), bound to a PACAP-specific receptor by NMR spectroscopy. Residues 3--7 form a unique beta-coil structure that is preceded by an N-terminal extended tail. This beta-coil creates a patch of hydrophobic residues that is important for receptor binding. In contrast, the C-terminal region (residues 8--21) forms an alpha-helix, similar to that in the micelle-bound PACAP. Thus, the conformational difference between PACAP in the receptor-bound and the micelle-bound states is limited to the N-terminal seven residues. This observation is consistent with the two-step ligand transportation model in which PACAP first binds to the membrane nonspecifically and then diffuses two-dimensionally in search of its receptor; a conformational change at the N-terminal region then allows specific interactions between the ligand and the receptor.
-
===RECEPTOR-BOUND CONFORMATION OF PACAP21===
+
Conformation of a peptide ligand bound to its G-protein coupled receptor.,Inooka H, Ohtaki T, Kitahara O, Ikegami T, Endo S, Kitada C, Ogi K, Onda H, Fujino M, Shirakawa M Nat Struct Biol. 2001 Feb;8(2):161-5. PMID:11175907<ref>PMID:11175907</ref>
-
{{ABSTRACT_PUBMED_11175907}}
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
==About this Structure==
+
<div class="pdbe-citations 1gea" style="background-color:#fffaf0;"></div>
-
[[1gea]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GEA OCA].
+
== References ==
-
[[Category: Endo, S.]]
+
<references/>
-
[[Category: Fujino, M.]]
+
__TOC__
-
[[Category: Ikegami, T.]]
+
</StructureSection>
-
[[Category: Inooka, H.]]
+
[[Category: Homo sapiens]]
-
[[Category: Kitada, C.]]
+
[[Category: Large Structures]]
-
[[Category: Kitahara, O.]]
+
[[Category: Endo S]]
-
[[Category: Ogi, K.]]
+
[[Category: Fujino M]]
-
[[Category: Ohtaki, T.]]
+
[[Category: Ikegami T]]
-
[[Category: Onda, H.]]
+
[[Category: Inooka H]]
-
[[Category: Shirakawa, M.]]
+
[[Category: Kitada C]]
-
[[Category: Beta coil]]
+
[[Category: Kitahara O]]
-
[[Category: Consecutive beta turn]]
+
[[Category: Ogi K]]
-
[[Category: Helix]]
+
[[Category: Ohtaki T]]
-
[[Category: Neuropeptide]]
+
[[Category: Onda H]]
-
[[Category: Type-i beta turn]]
+
[[Category: Shirakawa M]]
-
[[Category: Type-ii beta turn]]
+

Current revision

RECEPTOR-BOUND CONFORMATION OF PACAP21

PDB ID 1gea

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools