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5o47

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Current revision (19:07, 29 November 2023) (edit) (undo)
 
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==Structure of D80A-fructofuranosidase from Xanthophyllomyces dendrorhous complexed with fructosyl-hydroxytyrosol==
==Structure of D80A-fructofuranosidase from Xanthophyllomyces dendrorhous complexed with fructosyl-hydroxytyrosol==
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<StructureSection load='5o47' size='340' side='right' caption='[[5o47]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
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<StructureSection load='5o47' size='340' side='right'caption='[[5o47]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5o47]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_24202 Atcc 24202]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O47 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5O47 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5o47]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Phaffia_rhodozyma Phaffia rhodozyma]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O47 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5O47 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=975:4-(2-hydroxyethyl)benzene-1,2-diol'>975</scene>, <scene name='pdbligand=9OK:fructosyl-hydroxytyrosol'>9OK</scene>, <scene name='pdbligand=9WZ:(2~{S},3~{S},4~{S},5~{R})-2-[4-(2-hydroxyethyl)-2-oxidanyl-phenoxy]-2,5-bis(hydroxymethyl)oxolane-3,4-diol'>9WZ</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ann|5ann]], [[5fix|5fix]], [[5fk7|5fk7]], [[5fk8|5fk8]], [[5fkb|5fkb]], [[5fkc|5fkc]], [[5fmb|5fmb]], [[5fmc|5fmc]], [[5fmd|5fmd]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=975:4-(2-hydroxyethyl)benzene-1,2-diol'>975</scene>, <scene name='pdbligand=9OK:2-(3,4-dihydroxyphenyl)ethyl+beta-D-fructofuranoside'>9OK</scene>, <scene name='pdbligand=9WZ:2-hydroxy-4-(2-hydroxyethyl)phenyl+beta-D-fructofuranoside'>9WZ</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">INV ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264483 ATCC 24202])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5o47 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o47 OCA], [https://pdbe.org/5o47 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5o47 RCSB], [https://www.ebi.ac.uk/pdbsum/5o47 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5o47 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5o47 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o47 OCA], [http://pdbe.org/5o47 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5o47 RCSB], [http://www.ebi.ac.uk/pdbsum/5o47 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5o47 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/J7HDY4_PHARH J7HDY4_PHARH]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 24202]]
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[[Category: Large Structures]]
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[[Category: Ramirez-Escudero, M]]
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[[Category: Phaffia rhodozyma]]
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[[Category: Sanz-Aparicio, J]]
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[[Category: Ramirez-Escudero M]]
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[[Category: Antioxidant]]
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[[Category: Sanz-Aparicio J]]
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[[Category: Beta-fructofuranosidase]]
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[[Category: Carbohydrate]]
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[[Category: Catalysis]]
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[[Category: Catalytic domain]]
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[[Category: Cloning]]
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[[Category: Dimerization]]
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[[Category: Fungal protein]]
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[[Category: Glycoside hydrolase]]
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[[Category: Hydrolase]]
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[[Category: Hydroxityrosol]]
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[[Category: Invertase]]
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[[Category: Kinetic]]
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[[Category: Polyphenol]]
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[[Category: Substrate specificity]]
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[[Category: Transglycosylation]]
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Current revision

Structure of D80A-fructofuranosidase from Xanthophyllomyces dendrorhous complexed with fructosyl-hydroxytyrosol

PDB ID 5o47

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