This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3tps

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:16, 6 December 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3tps.png|left|200px]]
 
-
<!--
+
==Crystal structure of M-PMV dUTPASE complexed with dUPNPP substrate==
-
The line below this paragraph, containing "STRUCTURE_3tps", creates the "Structure Box" on the page.
+
<StructureSection load='3tps' size='340' side='right'caption='[[3tps]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3tps]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mason-Pfizer_monkey_virus Mason-Pfizer monkey virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TPS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TPS FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=DUP:2-DEOXYURIDINE+5-ALPHA,BETA-IMIDO-TRIPHOSPHATE'>DUP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-
{{STRUCTURE_3tps| PDB=3tps | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tps FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tps OCA], [https://pdbe.org/3tps PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tps RCSB], [https://www.ebi.ac.uk/pdbsum/3tps PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tps ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PRO_MPMV PRO_MPMV] Matrix protein. Nucleocapsid protein p14: Nucleocapsid protein. Capsid protein. The aspartyl protease mediates proteolytic cleavages of Gag and Gag-Pol polyproteins during or shortly after the release of the virion from the plasma membrane. Cleavages take place as an ordered, step-wise cascade to yield mature proteins. This process is called maturation. Displays maximal activity during the budding process just prior to particle release from the cell.[PROSITE-ProRule:PRU00275]<ref>PMID:9636364</ref> The aspartyl protease mediates proteolytic cleavages of Gag and Gag-Pol polyproteins during or shortly after the release of the virion from the plasma membrane. Cleavages take place as an ordered, step-wise cascade to yield mature proteins. This process is called maturation. Displays maximal activity during the budding process just prior to particle release from the cell.[PROSITE-ProRule:PRU00275]<ref>PMID:9636364</ref> Enhances the activity of the reverse transcriptase. May be part of the mature RT.<ref>PMID:22171253</ref>
-
===Crystal structure of M-PMV dUTPASE complexed with dUPNPP substrate===
+
==See Also==
-
 
+
*[[DUTPase 3D structures|DUTPase 3D structures]]
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
[[3tps]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mason-pfizer_monkey_virus Mason-pfizer monkey virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TPS OCA].
+
__TOC__
-
[[Category: Mason-pfizer monkey virus]]
+
</StructureSection>
-
[[Category: DUTP diphosphatase]]
+
[[Category: Large Structures]]
-
[[Category: Barabas, O.]]
+
[[Category: Mason-Pfizer monkey virus]]
-
[[Category: Nemeth, V.]]
+
[[Category: Barabas O]]
-
[[Category: Vertessy, B G.]]
+
[[Category: Nemeth V]]
-
[[Category: Hydrolase]]
+
[[Category: Vertessy BG]]
-
[[Category: Jelly roll]]
+

Current revision

Crystal structure of M-PMV dUTPASE complexed with dUPNPP substrate

PDB ID 3tps

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3tps"
Personal tools