This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1eb3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:57, 13 December 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==YEAST 5-AMINOLAEVULINIC ACID DEHYDRATASE 4,7-DIOXOSEBACIC ACID COMPLEX==
==YEAST 5-AMINOLAEVULINIC ACID DEHYDRATASE 4,7-DIOXOSEBACIC ACID COMPLEX==
-
<StructureSection load='1eb3' size='340' side='right' caption='[[1eb3]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
+
<StructureSection load='1eb3' size='340' side='right'caption='[[1eb3]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1eb3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EB3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1EB3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1eb3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EB3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EB3 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DSB:4,7-DIOXOSEBACIC+ACID'>DSB</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1aw5|1aw5]], [[1h7n|1h7n]], [[1h7o|1h7o]], [[1h7p|1h7p]], [[1h7r|1h7r]], [[1qml|1qml]], [[1qnv|1qnv]], [[1ylv|1ylv]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DSB:4,7-DIOXOSEBACIC+ACID'>DSB</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Porphobilinogen_synthase Porphobilinogen synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.24 4.2.1.24] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eb3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eb3 OCA], [https://pdbe.org/1eb3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eb3 RCSB], [https://www.ebi.ac.uk/pdbsum/1eb3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eb3 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1eb3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eb3 OCA], [http://pdbe.org/1eb3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1eb3 RCSB], [http://www.ebi.ac.uk/pdbsum/1eb3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1eb3 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/HEM2_YEAST HEM2_YEAST]] Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.
+
[https://www.uniprot.org/uniprot/HEM2_YEAST HEM2_YEAST] Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 30: Line 29:
</div>
</div>
<div class="pdbe-citations 1eb3" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1eb3" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Porphobilinogen synthase|Porphobilinogen synthase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 18824]]
+
[[Category: Large Structures]]
-
[[Category: Porphobilinogen synthase]]
+
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Brindley, A A]]
+
[[Category: Brindley AA]]
-
[[Category: Coates, L]]
+
[[Category: Coates L]]
-
[[Category: Cooper, J B]]
+
[[Category: Cooper JB]]
-
[[Category: Erskine, P T]]
+
[[Category: Erskine PT]]
-
[[Category: Neier, R]]
+
[[Category: Neier R]]
-
[[Category: Newbold, R]]
+
[[Category: Newbold R]]
-
[[Category: Shoolingin-Jordan, P M]]
+
[[Category: Shoolingin-Jordan PM]]
-
[[Category: Stauffer, F]]
+
[[Category: Stauffer F]]
-
[[Category: Warren, M J]]
+
[[Category: Warren MJ]]
-
[[Category: Wood, S P]]
+
[[Category: Wood SP]]
-
[[Category: Aldolase]]
+
-
[[Category: Dehydratase]]
+
-
[[Category: Tetrapyrrole synthesis]]
+
-
[[Category: Tim barrel]]
+

Current revision

YEAST 5-AMINOLAEVULINIC ACID DEHYDRATASE 4,7-DIOXOSEBACIC ACID COMPLEX

PDB ID 1eb3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools