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1gkb

From Proteopedia

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==CONCANAVALIN A, NEW CRYSTAL FORM==
==CONCANAVALIN A, NEW CRYSTAL FORM==
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<StructureSection load='1gkb' size='340' side='right' caption='[[1gkb]], [[Resolution|resolution]] 1.56&Aring;' scene=''>
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<StructureSection load='1gkb' size='340' side='right'caption='[[1gkb]], [[Resolution|resolution]] 1.56&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1gkb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Canavalia_ensiformis Canavalia ensiformis]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1e0i 1e0i]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GKB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GKB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1gkb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Canavalia_ensiformis Canavalia ensiformis]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1e0i 1e0i]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GKB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GKB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.56&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1qgl|1qgl]], [[1bxh|1bxh]], [[1c57|1c57]], [[1ces|1ces]], [[1cjp|1cjp]], [[1cvn|1cvn]], [[1dq0|1dq0]], [[1dq1|1dq1]], [[1dq2|1dq2]], [[1dq4|1dq4]], [[1dq5|1dq5]], [[1dq6|1dq6]], [[1enq|1enq]], [[1enr|1enr]], [[1ens|1ens]], [[1i3h|1i3h]], [[1jbc|1jbc]], [[1nls|1nls]], [[1ona|1ona]], [[1qny|1qny]], [[1tei|1tei]], [[1val|1val]], [[1vam|1vam]], [[2enr|2enr]], [[3enr|3enr]], [[1apn|1apn]], [[1azd|1azd]], [[1cn1|1cn1]], [[1cnv|1cnv]], [[1con|1con]], [[1dgl|1dgl]], [[1gic|1gic]], [[1qdc|1qdc]], [[1qdo|1qdo]], [[1scr|1scr]], [[1scs|1scs]], [[1vln|1vln]], [[2cna|2cna]], [[2ctv|2ctv]], [[3cna|3cna]], [[5cna|5cna]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gkb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gkb OCA], [http://pdbe.org/1gkb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gkb RCSB], [http://www.ebi.ac.uk/pdbsum/1gkb PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gkb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gkb OCA], [https://pdbe.org/1gkb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gkb RCSB], [https://www.ebi.ac.uk/pdbsum/1gkb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gkb ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/CONA_CANCT CONA_CANCT]] Glucose/D-mannose specific lectin.
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[https://www.uniprot.org/uniprot/CONA_CANEN CONA_CANEN] D-mannose specific lectin.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/1gkb_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/1gkb_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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==See Also==
==See Also==
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*[[Concanavalin A|Concanavalin A]]
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*[[Concanavalin 3D structures|Concanavalin 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Canavalia ensiformis]]
[[Category: Canavalia ensiformis]]
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[[Category: Hoechtl, P]]
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[[Category: Large Structures]]
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[[Category: Kantardjieff, K]]
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[[Category: Hoechtl P]]
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[[Category: Rupp, B]]
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[[Category: Kantardjieff K]]
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[[Category: Segelke, B]]
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[[Category: Rupp B]]
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[[Category: Lectin-binding protein]]
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[[Category: Segelke B]]

Current revision

CONCANAVALIN A, NEW CRYSTAL FORM

PDB ID 1gkb

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