This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1gvm
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='1gvm' size='340' side='right'caption='[[1gvm]], [[Resolution|resolution]] 2.80Å' scene=''> | <StructureSection load='1gvm' size='340' side='right'caption='[[1gvm]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1gvm]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1gvm]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GVM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GVM FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CHT:CHOLINE+ION'>CHT</scene>, <scene name='pdbligand=DDQ:DECYLAMINE-N,N-DIMETHYL-N-OXIDE'>DDQ</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> |
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gvm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gvm OCA], [https://pdbe.org/1gvm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gvm RCSB], [https://www.ebi.ac.uk/pdbsum/1gvm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gvm ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gvm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gvm OCA], [https://pdbe.org/1gvm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gvm RCSB], [https://www.ebi.ac.uk/pdbsum/1gvm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gvm ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/ALYS_STRPN ALYS_STRPN] Autolysins are involved in some important biological processes such as cell separation, cell-wall turnover, competence for genetic transformation, formation of the flagella and sporulation. Autolysin strictly depends on the presence of choline-containing cell walls for activity. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 33: | Line 34: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Streptococcus pneumoniae]] |
| - | [[Category: Fernandez-Tornero | + | [[Category: Fernandez-Tornero C]] |
| - | [[Category: Garcia | + | [[Category: Garcia E]] |
| - | [[Category: Gimenez-Gallego | + | [[Category: Gimenez-Gallego G]] |
| - | [[Category: Lopez | + | [[Category: Lopez R]] |
| - | [[Category: Romero | + | [[Category: Romero A]] |
| - | + | ||
| - | + | ||
Current revision
CHOLINE BINDING DOMAIN OF THE MAJOR AUTOLYSIN (C-LYTA) FROM STREPTOCOCCUS PNEUMONIAE
| |||||||||||

