1gwt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /> <applet load="1gwt" size="450" color="white" frame="true" align="right" spinBox="true" caption="1gwt, resolution 1.70&Aring;" /> '''RECOMBINANT HORSERA...)
Current revision (12:09, 13 December 2023) (edit) (undo)
 
(24 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1gwt.gif|left|200px]]<br />
 
-
<applet load="1gwt" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1gwt, resolution 1.70&Aring;" />
 
-
'''RECOMBINANT HORSERADISH PEROXIDASE C1A PHE221MET'''<br />
 
-
==About this Structure==
+
==RECOMBINANT HORSERADISH PEROXIDASE C1A PHE221MET==
-
1GWT is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]] with CA, NA, HEM and FER as [[http://en.wikipedia.org/wiki/ligands ligands]]. Active as [[http://en.wikipedia.org/wiki/ ]], with EC number [[http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7]]. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1GWT OCA]].
+
<StructureSection load='1gwt' size='340' side='right'caption='[[1gwt]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
[[Category: Armoracia rusticana]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[1gwt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GWT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GWT FirstGlance]. <br>
-
[[Category: Brissett, N.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
[[Category: Gajhede, M.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FER:3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC+ACID'>FER</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
[[Category: Henriksen, A.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gwt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gwt OCA], [https://pdbe.org/1gwt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gwt RCSB], [https://www.ebi.ac.uk/pdbsum/1gwt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gwt ProSAT]</span></td></tr>
-
[[Category: CA]]
+
</table>
-
[[Category: FER]]
+
== Function ==
-
[[Category: HEM]]
+
[https://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
-
[[Category: NA]]
+
== Evolutionary Conservation ==
-
[[Category: oxidoreductase]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: peroxidase]]
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gw/1gwt_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gwt ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Oct 29 16:18:22 2007''
+
==See Also==
 +
*[[Horseradish peroxidase|Horseradish peroxidase]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Armoracia rusticana]]
 +
[[Category: Large Structures]]
 +
[[Category: Brissett N]]
 +
[[Category: Gajhede M]]
 +
[[Category: Henriksen A]]

Current revision

RECOMBINANT HORSERADISH PEROXIDASE C1A PHE221MET

PDB ID 1gwt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools