1odb

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<StructureSection load='1odb' size='340' side='right'caption='[[1odb]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
<StructureSection load='1odb' size='340' side='right'caption='[[1odb]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1odb]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ODB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ODB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1odb]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ODB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ODB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.19&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1e8a|1e8a]], [[1gqm|1gqm]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1odb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1odb OCA], [http://pdbe.org/1odb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1odb RCSB], [http://www.ebi.ac.uk/pdbsum/1odb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1odb ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1odb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1odb OCA], [https://pdbe.org/1odb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1odb RCSB], [https://www.ebi.ac.uk/pdbsum/1odb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1odb ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/S10AC_HUMAN S10AC_HUMAN] S100A12 is a calcium-, zinc- and copper-binding protein which plays a prominent role in the regulation of inflammatory processes and immune response. Its proinflammatory activity involves recruitment of leukocytes, promotion of cytokine and chemokine production, and regulation of leukocyte adhesion and migration. Acts as an alarmin or a danger associated molecular pattern (DAMP) molecule and stimulates innate immune cells via binding to receptor for advanced glycation endproducts (AGER). Binding to AGER activates the MAP-kinase and NF-kappa-B signaling pathways leading to production of proinflammatory cytokines and up-regulation of cell adhesion molecules ICAM1 and VCAM1. Acts as a monocyte and mast cell chemoattractant. Can stimulate mast cell degranulation and activation which generates chemokines, histamine and cytokines inducing further leukocyte recruitment to the sites of inflammation. Can inhibit the activity of matrix metalloproteinases; MMP2, MMP3 and MMP9 by chelating Zn(2+) from their active sites. Possesses filariacidal and filariastatic activity. Calcitermin possesses antifungal activity against C.albicans and is also active against E.coli and P.aeruginosa but not L.monocytogenes and S.aureus.<ref>PMID:11522286</ref> <ref>PMID:17208591</ref> <ref>PMID:18292089</ref> <ref>PMID:19386136</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
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*[[S100 protein|S100 protein]]
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*[[S100 proteins 3D structures|S100 proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Antson, A A]]
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[[Category: Antson AA]]
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[[Category: Bronstein, I B]]
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[[Category: Bronstein IB]]
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[[Category: Dodson, G G]]
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[[Category: Dodson GG]]
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[[Category: Grist, S J]]
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[[Category: Grist SJ]]
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[[Category: Lukanidin, E M]]
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[[Category: Lukanidin EM]]
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[[Category: Maitland, N J]]
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[[Category: Maitland NJ]]
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[[Category: Moroz, O V]]
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[[Category: Moroz OV]]
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[[Category: Wilson, K S]]
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[[Category: Wilson KS]]
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[[Category: Calcium binding]]
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[[Category: Calcium-binding protein]]
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[[Category: Ef-hand]]
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[[Category: Host-parasite response]]
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[[Category: Metal binding protein]]
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[[Category: Metal-binding protein]]
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[[Category: S100 protein]]
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Current revision

THE CRYSTAL STRUCTURE OF HUMAN S100A12 - COPPER COMPLEX

PDB ID 1odb

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